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The map label for this gene is 119717854

Identifier: 119717854

GI number: 119717854

Start: 3851093

End: 3852805

Strand: Reverse

Name: 119717854

Synonym: Noca_3632

Alternate gene names: NA

Gene position: 3852805-3851093 (Counterclockwise)

Preceding gene: 119717855

Following gene: 119717853

Centisome position: 77.27

GC content: 70.81

Gene sequence:

>1713_bases
ATGAGGTTCGACTACGACGTGCTGGTGGTGGGGTCCGGCTTCGGCGGGTCCGTGACGGCGCTGCGCCTGACCGAGAAGGG
CTACCGGGTCGGCGTGATCGAGGCGGGCGCCCGGTTCGAGGACCAGGACCTGCCCGAGACCTCCTTCGAGGTCTCGAAGT
ACCTCTTCCGGCCCGAGATCGGCTGCTACGGCATCCAGCGCATCGACGCGCTCAAGGACTGCCTGATCGTCTCCGGGGCG
GGCGTGGGCGGGGGGTCGCTGGTCTACGCGAACACCCTCTACGAGCCGCTGCCGGCGTTCTACGCCGACGCCCAGTGGAG
CCACATCACCGACTGGCGCGCCGAGCTGGCGCCGTACTACGACCAGGCCAAGCGGATGCTGGGCGTCGTCGAGAACCCGC
TCCGCACGCCCTCCGACGAGATCATGGAGAAGGTGGCGACCGAGATGGGCGTCGCCGACACCTTCCACCCCACGCCGGTC
GGGGTGTTCTTCGGCGGTCCCGGGGCGGGCATGGGCCAGGCCGTGGACGATCCGTTCTTCGGCGGCGCCGGGCCGGACCG
GCGTACCTGCATCGCCTGCGGCTCGTGCATGACCGGCTGCCGGCACAACGCCAAGAACACCCTGGTCAAGAACTACCTCT
ACCTCGCCGAGCGCAACGGCGCGAAGGTGATGCCGCTGACCACGGTGACCCGGGTCCGCCCGCGCGAGGGCGGCGGGTAC
GACGTGCACGTCCGCTACACGAAGGCGAAGATCGACCGGCGCTCGGTGCGGCGGGTGCTGAGCGCCGAGCAGGTCGTGTT
CGCCGCGTCCGCGCTCGGCACCCAGCGGCTGCTGCACAAGATGAAGGACGAGGGGCACCTGCCCCGCCTCTCCGACCGCC
TCGGTGAGCTGGCCCGGACCAACTCCGAGTCGATCGGCGGCGTGGTCGCGCCGGACCTGTCGGTCGACTACAGCCAGGGC
ATCGCGATCACCAGCAGCTTCCACCCGGACGCGAACACCCACATCGAGCCGGTCCGCTACGGACCGGGCAGCAACCTGAT
GTCGTTGCTCCAGTCGGTGCTCACCGACGGTGACGGCGACGAGCCGCGCTGGCGGACCTGGCTGCGCGAGGTGTGGCGCC
AGCGCAAGCAGGTGCCGAACCTCTACGACATGAAGCACTGGTCCGAGCGCACGATCATCGCGTTGGTGATGCAGAGCGTG
GACAACTCGATCACCACCTACACCAAGCGGATCCCCGGCACCCGCAAGCGCTACCTGACCTCCAAGCAGGGCCACGGCGA
GCCGAACCCGACCTGGATCCCGGCCGGCAACGAGGCGATCCGGGCGATGGCCCGGATCACCGGCGGCTTCCCCGGCAGTG
CGGTCGGCGACGCCTTCAACATGCCGCTGACCGCCCACTTCCTGGGCGGCTGCCCGATCGGCGACTCCCGGGAGACCGGG
GTGGTGGACCCCTACCAGCGGGTCTACGGGTACCCCGGGCTGCACATCGCCGACGGCTCGGCGATCTCGGCGAACCTCGG
CGTGAACCCGTCGCTGACGATCACCGCGCAGGCGGAGCGCGCCATGTCGTTCTGGCCCAACAAGGGCGAGGCCGACCCGC
GGCCCGACCTGGGCGCGGCGTACCAGCGGATCCAGCCGGTCCGCCCCGCCGCCCCGGTGGTCCCCGACGACGCGCCCGGG
GCGCTGCGGCTGCCGATCGTCGGCGTCAGCTGA

Upstream 100 bases:

>100_bases
AGCGGCTGATCCGGTTCGCCCCGCAGTACGGCATGTCCGACCAGATGTACGCCAAGGTCATGAACGCCAACCTGCGCCTG
ATGAAGAAGGTGGGACGCGC

Downstream 100 bases:

>100_bases
GCGTGGATCCGAACCGGACGGGAATCTGCAGAAATTTCCTGAGAATGGCCCGTGACCCGGGTCAGCACGGGTCGTTGAGC
CAGCGGACCCGGCAAATACG

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Glucose-Methanol-Choline Oxidoreductase; GMC Oxidoreductase; Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; Choline Dehydrogenase; Cholesterol Oxidase ChoD; Oxidase; Oxidoreductase Glucose-Methanol-Choline Family; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Gmc Oxidoreductase Family Protein; Ferredoxin Domain Gmc Oxidoreductase; Cholesterol Oxidase ChoD; GMC Family Oxidoreductase; Cholesterol-O2 Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; GMC Oxidoreductase Family Protein; Cholesterol Oxidase Chod; GMC Oxidoreductase Family

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MRFDYDVLVVGSGFGGSVTALRLTEKGYRVGVIEAGARFEDQDLPETSFEVSKYLFRPEIGCYGIQRIDALKDCLIVSGA
GVGGGSLVYANTLYEPLPAFYADAQWSHITDWRAELAPYYDQAKRMLGVVENPLRTPSDEIMEKVATEMGVADTFHPTPV
GVFFGGPGAGMGQAVDDPFFGGAGPDRRTCIACGSCMTGCRHNAKNTLVKNYLYLAERNGAKVMPLTTVTRVRPREGGGY
DVHVRYTKAKIDRRSVRRVLSAEQVVFAASALGTQRLLHKMKDEGHLPRLSDRLGELARTNSESIGGVVAPDLSVDYSQG
IAITSSFHPDANTHIEPVRYGPGSNLMSLLQSVLTDGDGDEPRWRTWLREVWRQRKQVPNLYDMKHWSERTIIALVMQSV
DNSITTYTKRIPGTRKRYLTSKQGHGEPNPTWIPAGNEAIRAMARITGGFPGSAVGDAFNMPLTAHFLGGCPIGDSRETG
VVDPYQRVYGYPGLHIADGSAISANLGVNPSLTITAQAERAMSFWPNKGEADPRPDLGAAYQRIQPVRPAAPVVPDDAPG
ALRLPIVGVS

Sequences:

>Translated_570_residues
MRFDYDVLVVGSGFGGSVTALRLTEKGYRVGVIEAGARFEDQDLPETSFEVSKYLFRPEIGCYGIQRIDALKDCLIVSGA
GVGGGSLVYANTLYEPLPAFYADAQWSHITDWRAELAPYYDQAKRMLGVVENPLRTPSDEIMEKVATEMGVADTFHPTPV
GVFFGGPGAGMGQAVDDPFFGGAGPDRRTCIACGSCMTGCRHNAKNTLVKNYLYLAERNGAKVMPLTTVTRVRPREGGGY
DVHVRYTKAKIDRRSVRRVLSAEQVVFAASALGTQRLLHKMKDEGHLPRLSDRLGELARTNSESIGGVVAPDLSVDYSQG
IAITSSFHPDANTHIEPVRYGPGSNLMSLLQSVLTDGDGDEPRWRTWLREVWRQRKQVPNLYDMKHWSERTIIALVMQSV
DNSITTYTKRIPGTRKRYLTSKQGHGEPNPTWIPAGNEAIRAMARITGGFPGSAVGDAFNMPLTAHFLGGCPIGDSRETG
VVDPYQRVYGYPGLHIADGSAISANLGVNPSLTITAQAERAMSFWPNKGEADPRPDLGAAYQRIQPVRPAAPVVPDDAPG
ALRLPIVGVS
>Mature_570_residues
MRFDYDVLVVGSGFGGSVTALRLTEKGYRVGVIEAGARFEDQDLPETSFEVSKYLFRPEIGCYGIQRIDALKDCLIVSGA
GVGGGSLVYANTLYEPLPAFYADAQWSHITDWRAELAPYYDQAKRMLGVVENPLRTPSDEIMEKVATEMGVADTFHPTPV
GVFFGGPGAGMGQAVDDPFFGGAGPDRRTCIACGSCMTGCRHNAKNTLVKNYLYLAERNGAKVMPLTTVTRVRPREGGGY
DVHVRYTKAKIDRRSVRRVLSAEQVVFAASALGTQRLLHKMKDEGHLPRLSDRLGELARTNSESIGGVVAPDLSVDYSQG
IAITSSFHPDANTHIEPVRYGPGSNLMSLLQSVLTDGDGDEPRWRTWLREVWRQRKQVPNLYDMKHWSERTIIALVMQSV
DNSITTYTKRIPGTRKRYLTSKQGHGEPNPTWIPAGNEAIRAMARITGGFPGSAVGDAFNMPLTAHFLGGCPIGDSRETG
VVDPYQRVYGYPGLHIADGSAISANLGVNPSLTITAQAERAMSFWPNKGEADPRPDLGAAYQRIQPVRPAAPVVPDDAPG
ALRLPIVGVS

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62057; Mature: 62057

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDYDVLVVGSGFGGSVTALRLTEKGYRVGVIEAGARFEDQDLPETSFEVSKYLFRPEI
CCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
GCYGIQRIDALKDCLIVSGAGVGGGSLVYANTLYEPLPAFYADAQWSHITDWRAELAPYY
CCCHHHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DQAKRMLGVVENPLRTPSDEIMEKVATEMGVADTFHPTPVGVFFGGPGAGMGQAVDDPFF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
GGAGPDRRTCIACGSCMTGCRHNAKNTLVKNYLYLAERNGAKVMPLTTVTRVRPREGGGY
CCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHEEEECCCCEEEEEEHHEEECCCCCCCE
DVHVRYTKAKIDRRSVRRVLSAEQVVFAASALGTQRLLHKMKDEGHLPRLSDRLGELART
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
NSESIGGVVAPDLSVDYSQGIAITSSFHPDANTHIEPVRYGPGSNLMSLLQSVLTDGDGD
CCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCC
EPRWRTWLREVWRQRKQVPNLYDMKHWSERTIIALVMQSVDNSITTYTKRIPGTRKRYLT
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHC
SKQGHGEPNPTWIPAGNEAIRAMARITGGFPGSAVGDAFNMPLTAHFLGGCPIGDSRETG
CCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCC
VVDPYQRVYGYPGLHIADGSAISANLGVNPSLTITAQAERAMSFWPNKGEADPRPDLGAA
CCCHHHHHCCCCCEEEECCCEEEECCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCHHHH
YQRIQPVRPAAPVVPDDAPGALRLPIVGVS
HHHCCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRFDYDVLVVGSGFGGSVTALRLTEKGYRVGVIEAGARFEDQDLPETSFEVSKYLFRPEI
CCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
GCYGIQRIDALKDCLIVSGAGVGGGSLVYANTLYEPLPAFYADAQWSHITDWRAELAPYY
CCCHHHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DQAKRMLGVVENPLRTPSDEIMEKVATEMGVADTFHPTPVGVFFGGPGAGMGQAVDDPFF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
GGAGPDRRTCIACGSCMTGCRHNAKNTLVKNYLYLAERNGAKVMPLTTVTRVRPREGGGY
CCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHEEEECCCCEEEEEEHHEEECCCCCCCE
DVHVRYTKAKIDRRSVRRVLSAEQVVFAASALGTQRLLHKMKDEGHLPRLSDRLGELART
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
NSESIGGVVAPDLSVDYSQGIAITSSFHPDANTHIEPVRYGPGSNLMSLLQSVLTDGDGD
CCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCC
EPRWRTWLREVWRQRKQVPNLYDMKHWSERTIIALVMQSVDNSITTYTKRIPGTRKRYLT
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHC
SKQGHGEPNPTWIPAGNEAIRAMARITGGFPGSAVGDAFNMPLTAHFLGGCPIGDSRETG
CCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCC
VVDPYQRVYGYPGLHIADGSAISANLGVNPSLTITAQAERAMSFWPNKGEADPRPDLGAA
CCCHHHHHCCCCCEEEECCCEEEECCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCHHHH
YQRIQPVRPAAPVVPDDAPGALRLPIVGVS
HHHCCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA