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The map label for this gene is nreC [H]

Identifier: 119717828

GI number: 119717828

Start: 3823558

End: 3824247

Strand: Reverse

Name: nreC [H]

Synonym: Noca_3606

Alternate gene names: 119717828

Gene position: 3824247-3823558 (Counterclockwise)

Preceding gene: 119717829

Following gene: 119717827

Centisome position: 76.7

GC content: 73.04

Gene sequence:

>690_bases
ATGAGTGAGCAGCACCCGGCGTCCCGCGCCGGGGGACCGGCGGCGATCGTGATCGTCGACGACCACGCCATGTTCCGGCG
CGGAGTGCGCGCCGAGCTCGAGAGCGCCGGCCGCGGGCTGGTCCGGGTGCTCGCCGAGGCCGCCGACGTGGACGAGGCGG
TGGCGGCGGTCTCGACCCACCGCCCCGACGTGGTGCTGCTCGACGTCCACCTGCCCGGGGGCGGTGGGGCCGAGGTGATG
CGCAGGGTGACGGCCTCGCACGCCTCCCCGGACACCCGCTACCTCGCCCTGTCGGTCAGCGATGCCGCCGAGGACGTCAT
CGGGACCATCCGCGGCGGGGCGCGCGGCTACGTCACCAAGACCATCACCGGTCCCGAGCTGGTCCAGGCGATCGGCCGGG
TCGCCGAGGGCGACGCCGTCTTCTCGCCCCGGCTGGCCGGCTTCGTCCTGGACGCGTTCTCCGGCTCGATCGACGTCGCC
GCGGTGGACGAGGACCTCGACCGGCTCACCGAGCGCGAGCGGGAGGTGATGCGCCTGATCGCCCGCGGCTACGCCTACAA
GGAGGTCGCGAAGGAGCTGTTCATCTCGATCAAGACCGTCGAGACCCACATGTCCAGCGTGCTGCGCAAGCTCCAGCTCT
CCTCGCGCCACGAGCTCACCCGCTGGGCCTCCGACCGCCGGCTGCTCTAG

Upstream 100 bases:

>100_bases
ATGCAGCGTCACGGAGGCACGGCCGAGATCCGGTCGGTGCCCGGTGAGGGGACCGAGGTGCGCCTGCACCTGTCCCGGCA
GTCGCGACAGGAGGAGAACG

Downstream 100 bases:

>100_bases
GAGCCGGCACCGCCTAGGCTCCTCCCATGGAGTTCCTGCGCCACGTCCTGCTCGTCGTCCACATGCTCGGCTTCGCCGCC
CTGGTCGGCGGGCTGCTCGT

Product: regulatory protein LuxR

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSEQHPASRAGGPAAIVIVDDHAMFRRGVRAELESAGRGLVRVLAEAADVDEAVAAVSTHRPDVVLLDVHLPGGGGAEVM
RRVTASHASPDTRYLALSVSDAAEDVIGTIRGGARGYVTKTITGPELVQAIGRVAEGDAVFSPRLAGFVLDAFSGSIDVA
AVDEDLDRLTEREREVMRLIARGYAYKEVAKELFISIKTVETHMSSVLRKLQLSSRHELTRWASDRRLL

Sequences:

>Translated_229_residues
MSEQHPASRAGGPAAIVIVDDHAMFRRGVRAELESAGRGLVRVLAEAADVDEAVAAVSTHRPDVVLLDVHLPGGGGAEVM
RRVTASHASPDTRYLALSVSDAAEDVIGTIRGGARGYVTKTITGPELVQAIGRVAEGDAVFSPRLAGFVLDAFSGSIDVA
AVDEDLDRLTEREREVMRLIARGYAYKEVAKELFISIKTVETHMSSVLRKLQLSSRHELTRWASDRRLL
>Mature_228_residues
SEQHPASRAGGPAAIVIVDDHAMFRRGVRAELESAGRGLVRVLAEAADVDEAVAAVSTHRPDVVLLDVHLPGGGGAEVMR
RVTASHASPDTRYLALSVSDAAEDVIGTIRGGARGYVTKTITGPELVQAIGRVAEGDAVFSPRLAGFVLDAFSGSIDVAA
VDEDLDRLTEREREVMRLIARGYAYKEVAKELFISIKTVETHMSSVLRKLQLSSRHELTRWASDRRLL

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=208, Percent_Identity=36.5384615384615, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787473, Length=217, Percent_Identity=32.7188940092166, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1788222, Length=208, Percent_Identity=31.7307692307692, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1790102, Length=213, Percent_Identity=31.4553990610329, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788712, Length=214, Percent_Identity=29.4392523364486, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786747, Length=219, Percent_Identity=23.2876712328767, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24664; Mature: 24533

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQHPASRAGGPAAIVIVDDHAMFRRGVRAELESAGRGLVRVLAEAADVDEAVAAVSTH
CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHCC
RPDVVLLDVHLPGGGGAEVMRRVTASHASPDTRYLALSVSDAAEDVIGTIRGGARGYVTK
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEEE
TITGPELVQAIGRVAEGDAVFSPRLAGFVLDAFSGSIDVAAVDEDLDRLTEREREVMRLI
ECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH
ARGYAYKEVAKELFISIKTVETHMSSVLRKLQLSSRHELTRWASDRRLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEQHPASRAGGPAAIVIVDDHAMFRRGVRAELESAGRGLVRVLAEAADVDEAVAAVSTH
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHCC
RPDVVLLDVHLPGGGGAEVMRRVTASHASPDTRYLALSVSDAAEDVIGTIRGGARGYVTK
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEEE
TITGPELVQAIGRVAEGDAVFSPRLAGFVLDAFSGSIDVAAVDEDLDRLTEREREVMRLI
ECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH
ARGYAYKEVAKELFISIKTVETHMSSVLRKLQLSSRHELTRWASDRRLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]