| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717796
Identifier: 119717796
GI number: 119717796
Start: 3792140
End: 3792676
Strand: Reverse
Name: 119717796
Synonym: Noca_3574
Alternate gene names: NA
Gene position: 3792676-3792140 (Counterclockwise)
Preceding gene: 119717797
Following gene: 119717793
Centisome position: 76.07
GC content: 74.3
Gene sequence:
>537_bases TTGGCTGACGCCGGCCCCGACCCGACGCCCGACGAGCGGGACCAGACCTACGACCGCTGGTCCCGCACGCAGGCGCTGAG CAACCGCGGGTACCTGATCGCCGCGGTCGTCCCGTTCGTGATCGCCGCGATCGGGTTCGGCATCGTCGCCCTGGTCTCCT CCGGCGACGAGGCCGGCAGCGGCACCACGGTCCGGCTGCCGATCTCCGGTTGGGCGCCGACGTCCGGTGGCGGCGACGAT GCCCTGATCCAGGGCGTGCTGCGCCTCGACGACCACTACTGCGTCTACCTCGAGGCGGGCCAGGACGGGGCCGACCCCGG GAAGGTGTGGCCGGTCTGGCCGGCGGGCTTCAAGGCCACCCGCGAGGGCGACCGGCTCACGCTGCTCGACGCGGACGGCA AGGTCGTCGCCCACGACGGCGACCAGGTCTCGATGAGCGGCGGCTTCGGCCCGGCCGGCACCTTCGCCGGCGAGCCGTGC GTGCCGGCGAGCGGCGAGGTCGCGATCGTGCAGTCCGCGGTGACGGTCGAGCGCTGA
Upstream 100 bases:
>100_bases GGCTCTCCGGCCGACATCGGCGGCTACTACCGGCCCGACGACGCCTTGGCGTCCGCGGTGATGCGGCCCTCGGCGACCCT GAACGAGGCGCTGGCCTCCC
Downstream 100 bases:
>100_bases CGCACAGGTCGTGCGGTGCCGTGCGGGTTGCTCAGGAAGCAGCCGCCTGCATGGCGTCGGACATGCGCTGGATGGCGGCG TCGAGCTCCTCGGCGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MADAGPDPTPDERDQTYDRWSRTQALSNRGYLIAAVVPFVIAAIGFGIVALVSSGDEAGSGTTVRLPISGWAPTSGGGDD ALIQGVLRLDDHYCVYLEAGQDGADPGKVWPVWPAGFKATREGDRLTLLDADGKVVAHDGDQVSMSGGFGPAGTFAGEPC VPASGEVAIVQSAVTVER
Sequences:
>Translated_178_residues MADAGPDPTPDERDQTYDRWSRTQALSNRGYLIAAVVPFVIAAIGFGIVALVSSGDEAGSGTTVRLPISGWAPTSGGGDD ALIQGVLRLDDHYCVYLEAGQDGADPGKVWPVWPAGFKATREGDRLTLLDADGKVVAHDGDQVSMSGGFGPAGTFAGEPC VPASGEVAIVQSAVTVER >Mature_177_residues ADAGPDPTPDERDQTYDRWSRTQALSNRGYLIAAVVPFVIAAIGFGIVALVSSGDEAGSGTTVRLPISGWAPTSGGGDDA LIQGVLRLDDHYCVYLEAGQDGADPGKVWPVWPAGFKATREGDRLTLLDADGKVVAHDGDQVSMSGGFGPAGTFAGEPCV PASGEVAIVQSAVTVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18374; Mature: 18242
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAGPDPTPDERDQTYDRWSRTQALSNRGYLIAAVVPFVIAAIGFGIVALVSSGDEAGS CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEEEEECCCCCCC GTTVRLPISGWAPTSGGGDDALIQGVLRLDDHYCVYLEAGQDGADPGKVWPVWPAGFKAT CCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCCCEEC REGDRLTLLDADGKVVAHDGDQVSMSGGFGPAGTFAGEPCVPASGEVAIVQSAVTVER CCCCEEEEEECCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure ADAGPDPTPDERDQTYDRWSRTQALSNRGYLIAAVVPFVIAAIGFGIVALVSSGDEAGS CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEEEEECCCCCCC GTTVRLPISGWAPTSGGGDDALIQGVLRLDDHYCVYLEAGQDGADPGKVWPVWPAGFKAT CCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCCCEEC REGDRLTLLDADGKVVAHDGDQVSMSGGFGPAGTFAGEPCVPASGEVAIVQSAVTVER CCCCEEEEEECCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA