| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717793
Identifier: 119717793
GI number: 119717793
Start: 3788628
End: 3789377
Strand: Reverse
Name: 119717793
Synonym: Noca_3571
Alternate gene names: NA
Gene position: 3789377-3788628 (Counterclockwise)
Preceding gene: 119717796
Following gene: 119717792
Centisome position: 76.0
GC content: 64.67
Gene sequence:
>750_bases ATGGACACTGCGCAAGTCGCCGCTGACCGAGCTCTTGTCGAAACAGTAGCGATGCTCACCGACACCGGACTGGCCGCGAA GGTGGCTGACCTGACGGGGGAGGTGTTCAAACGCAACCTCGAACGGCACGAGCCCGGCGAGCTCGGCGACACACCCACCT CGTTCGGTGTGCAGTGCTCGGAGAACCTCAAGACCCTCGCGTTGCGCCGGTTCTATGGCGAAGGCGACGAGGTCGACTCC GAACACTGGAACGTCCCAGGGTTGAAGGTGGCGACCGTGCGGAACAGCCTGATGTTCGAGCAAGGTGGGCGGCACGTGTA CGTGATGAAAGCGCCCTATGCTGAAGGACGAATGCCTCGCTGGGACCTGTTCAACTGGTCCCAGGCTTCCGCCATCCGGC ACAGCATCGCCGAAACGAACACCGACACCCTCGGCGGCTACACCACCACCGCCAACGTCGAAGATCCGCTATTCGACCAT CCCGCCAAGCCCCGCGTGGTCCGCACCTATCTCCTCGTATGGGCCGGCGACACCAAGACCGCATCGACTGCGGGCTGGTT GACCGTCCCAGTGCTCGGGCAGCGCCCATTCGTCGCAATGCAGCCCCTGTGGTGGGACGAGGAGATGGCGTCCGAGGCCA CCCCATCCGTACGTTCCGCGGCCTCTTCGGCCCCGAGCTTTGATCAGCGTGCCGGTGCGACGCCATCCGTCGTCGTGCGA CCTGCTACCCAGGAGGGCGGCGCTTCATGA
Upstream 100 bases:
>100_bases CCCGCGCCTGCAACCATTTCACTTCAGTTCTTCACAACTTTGTCGCAAATCGGCCCCCGGACTCGTGAGCGAGTGTGCGC ATCTGTGCTTACATGTACCC
Downstream 100 bases:
>100_bases CCGGGCCGGTGCGAGAGCCGGCTGCTGGTACCGACTTCGACGGGACACGCCTTACCGTCGCGCGTCGGCTGCGCCGCAAG ACGAAAGCACAACTCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDTAQVAADRALVETVAMLTDTGLAAKVADLTGEVFKRNLERHEPGELGDTPTSFGVQCSENLKTLALRRFYGEGDEVDS EHWNVPGLKVATVRNSLMFEQGGRHVYVMKAPYAEGRMPRWDLFNWSQASAIRHSIAETNTDTLGGYTTTANVEDPLFDH PAKPRVVRTYLLVWAGDTKTASTAGWLTVPVLGQRPFVAMQPLWWDEEMASEATPSVRSAASSAPSFDQRAGATPSVVVR PATQEGGAS
Sequences:
>Translated_249_residues MDTAQVAADRALVETVAMLTDTGLAAKVADLTGEVFKRNLERHEPGELGDTPTSFGVQCSENLKTLALRRFYGEGDEVDS EHWNVPGLKVATVRNSLMFEQGGRHVYVMKAPYAEGRMPRWDLFNWSQASAIRHSIAETNTDTLGGYTTTANVEDPLFDH PAKPRVVRTYLLVWAGDTKTASTAGWLTVPVLGQRPFVAMQPLWWDEEMASEATPSVRSAASSAPSFDQRAGATPSVVVR PATQEGGAS >Mature_249_residues MDTAQVAADRALVETVAMLTDTGLAAKVADLTGEVFKRNLERHEPGELGDTPTSFGVQCSENLKTLALRRFYGEGDEVDS EHWNVPGLKVATVRNSLMFEQGGRHVYVMKAPYAEGRMPRWDLFNWSQASAIRHSIAETNTDTLGGYTTTANVEDPLFDH PAKPRVVRTYLLVWAGDTKTASTAGWLTVPVLGQRPFVAMQPLWWDEEMASEATPSVRSAASSAPSFDQRAGATPSVVVR PATQEGGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27097; Mature: 27097
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTAQVAADRALVETVAMLTDTGLAAKVADLTGEVFKRNLERHEPGELGDTPTSFGVQCS CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEH ENLKTLALRRFYGEGDEVDSEHWNVPGLKVATVRNSLMFEQGGRHVYVMKAPYAEGRMPR HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCC WDLFNWSQASAIRHSIAETNTDTLGGYTTTANVEDPLFDHPAKPRVVRTYLLVWAGDTKT CCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCC ASTAGWLTVPVLGQRPFVAMQPLWWDEEMASEATPSVRSAASSAPSFDQRAGATPSVVVR CCCCCEEEEEECCCCCCEEECCCCCCHHHHHHCCCHHHHHHCCCCCCHHHCCCCCCEEEE PATQEGGAS CCCCCCCCC >Mature Secondary Structure MDTAQVAADRALVETVAMLTDTGLAAKVADLTGEVFKRNLERHEPGELGDTPTSFGVQCS CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEH ENLKTLALRRFYGEGDEVDSEHWNVPGLKVATVRNSLMFEQGGRHVYVMKAPYAEGRMPR HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCC WDLFNWSQASAIRHSIAETNTDTLGGYTTTANVEDPLFDHPAKPRVVRTYLLVWAGDTKT CCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCC ASTAGWLTVPVLGQRPFVAMQPLWWDEEMASEATPSVRSAASSAPSFDQRAGATPSVVVR CCCCCEEEEEECCCCCCEEECCCCCCHHHHHHCCCHHHHHHCCCCCCHHHCCCCCCEEEE PATQEGGAS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA