Click here to switch to the map view.

The map label for this gene is 119717792

Identifier: 119717792

GI number: 119717792

Start: 3787513

End: 3788631

Strand: Reverse

Name: 119717792

Synonym: Noca_3570

Alternate gene names: NA

Gene position: 3788631-3787513 (Counterclockwise)

Preceding gene: 119717793

Following gene: 119717791

Centisome position: 75.99

GC content: 65.59

Gene sequence:

>1119_bases
ATGACCGGGCCGGTGCGAGAGCCGGCTGCTGGTACCGACTTCGACGGGACACGCCTTACCGTCGCGCGTCGGCTGCGCCG
CAAGACGAAAGCACAACTCGCACGCGAACTCGGCATCAGCGCGACCGCGATAGCGCAGTATGAGAAGGGCCAGGCGCGCC
CGTCCTCGGGCGTCCTCAACCAAATCTGCCTAAGCCTCGGCCTTCCGCGCGAGTTCTTCGGAGTCTCGAGGCCCCTGACG
CTCCTCCCCGCATCCGGGGCCCACTTCCGCTCCCTGCGCGCCACTCCAGCCACGTCCCGCGAGCAAGCACTCGCATACGG
CGAACTGAGCCTGGAGCTCATCGACCTCATCAGCCAGTACGTGCACCTGCCACCCGTGCGTCTCCCAGAAGTCGACATCC
CAGACGAACTCACCGACGACGACATCATCAGCGCCGCCAACGGCACACGCGCAGCATGGAACATCGCCCCCGGGCCCGTG
CCATCACTCGTCCAGACGATGGAGGCACACGGCATCGTCGTGCTGCGCCTACCCGGCGACACCCCTCACGCAGTCGACGC
ATTCTCGACCTTCACTGCACGTCGACCCCTGGTGTTCCTGTCCCCAGCGAAGAACGACAAGGGGCGCAGTCGCTTTGACG
CCGCACACGAACTAGGCCACCTCGTCCTTCACCCAGATACCGAGCCCGGTTCGAAGCTCGTCGAACAACAGGCGCACAGG
TTCGCGAGCGAGTTCCTGATGCCGCGCGACCAAATCATCTCCGACCTACCCCGCCGCATCGACTGGCCAAAGTTCCACGA
ACTCAAGCGGCACTGGGGCGTCAGCCTGAGGGCACTCGTATATCGCGCCCATGCCCTGGGCCGACTTTCAGAAGCGTCCT
ACCGACGTGCGAACCAGCAGCTCTCCCAGTGGGGACTTCCCGAGCCGGGCGAACTGGGCCCCGCCGAAACGCCGACCCTT
CTAGGTCTGGTGCAGACGACCATGCGCGACAGCGGGCTCGATCTTCACGACATCCTTGCCTCTAGTCGCATCGCACCCGC
ACTTGCAGAAGAGATCGTGCGCGCCGGGTCGGACAACCGGCCCACCCTCGCCGTCGCGCCCTCCGACGCATGGAACTAG

Upstream 100 bases:

>100_bases
CCGTACGTTCCGCGGCCTCTTCGGCCCCGAGCTTTGATCAGCGTGCCGGTGCGACGCCATCCGTCGTCGTGCGACCTGCT
ACCCAGGAGGGCGGCGCTTC

Downstream 100 bases:

>100_bases
AGCAATCGCTGTCACCCTCGCGACCTTCGAGGCAAGTGACCGCTCATCGGCAGACCTGGTCGTTTGCTTCCATGTCGACA
GGCGGCAACTGGACGATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Zn Peptidase; Transcriptional Regulator HTH_3 Family; Conserved Domain Protein; Transcription Regulator; XRE Family Transcriptional Regulator; Phage-Like Protein; Regulatory Protein; DNA-Bining Transcriptional Regulator; Adenine Deaminase

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTGPVREPAAGTDFDGTRLTVARRLRRKTKAQLARELGISATAIAQYEKGQARPSSGVLNQICLSLGLPREFFGVSRPLT
LLPASGAHFRSLRATPATSREQALAYGELSLELIDLISQYVHLPPVRLPEVDIPDELTDDDIISAANGTRAAWNIAPGPV
PSLVQTMEAHGIVVLRLPGDTPHAVDAFSTFTARRPLVFLSPAKNDKGRSRFDAAHELGHLVLHPDTEPGSKLVEQQAHR
FASEFLMPRDQIISDLPRRIDWPKFHELKRHWGVSLRALVYRAHALGRLSEASYRRANQQLSQWGLPEPGELGPAETPTL
LGLVQTTMRDSGLDLHDILASSRIAPALAEEIVRAGSDNRPTLAVAPSDAWN

Sequences:

>Translated_372_residues
MTGPVREPAAGTDFDGTRLTVARRLRRKTKAQLARELGISATAIAQYEKGQARPSSGVLNQICLSLGLPREFFGVSRPLT
LLPASGAHFRSLRATPATSREQALAYGELSLELIDLISQYVHLPPVRLPEVDIPDELTDDDIISAANGTRAAWNIAPGPV
PSLVQTMEAHGIVVLRLPGDTPHAVDAFSTFTARRPLVFLSPAKNDKGRSRFDAAHELGHLVLHPDTEPGSKLVEQQAHR
FASEFLMPRDQIISDLPRRIDWPKFHELKRHWGVSLRALVYRAHALGRLSEASYRRANQQLSQWGLPEPGELGPAETPTL
LGLVQTTMRDSGLDLHDILASSRIAPALAEEIVRAGSDNRPTLAVAPSDAWN
>Mature_371_residues
TGPVREPAAGTDFDGTRLTVARRLRRKTKAQLARELGISATAIAQYEKGQARPSSGVLNQICLSLGLPREFFGVSRPLTL
LPASGAHFRSLRATPATSREQALAYGELSLELIDLISQYVHLPPVRLPEVDIPDELTDDDIISAANGTRAAWNIAPGPVP
SLVQTMEAHGIVVLRLPGDTPHAVDAFSTFTARRPLVFLSPAKNDKGRSRFDAAHELGHLVLHPDTEPGSKLVEQQAHRF
ASEFLMPRDQIISDLPRRIDWPKFHELKRHWGVSLRALVYRAHALGRLSEASYRRANQQLSQWGLPEPGELGPAETPTLL
GLVQTTMRDSGLDLHDILASSRIAPALAEEIVRAGSDNRPTLAVAPSDAWN

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40697; Mature: 40566

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPVREPAAGTDFDGTRLTVARRLRRKTKAQLARELGISATAIAQYEKGQARPSSGVLN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
QICLSLGLPREFFGVSRPLTLLPASGAHFRSLRATPATSREQALAYGELSLELIDLISQY
HHHHHHCCCHHHHCCCCCCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VHLPPVRLPEVDIPDELTDDDIISAANGTRAAWNIAPGPVPSLVQTMEAHGIVVLRLPGD
HCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCC
TPHAVDAFSTFTARRPLVFLSPAKNDKGRSRFDAAHELGHLVLHPDTEPGSKLVEQQAHR
CCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
FASEFLMPRDQIISDLPRRIDWPKFHELKRHWGVSLRALVYRAHALGRLSEASYRRANQQ
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQWGLPEPGELGPAETPTLLGLVQTTMRDSGLDLHDILASSRIAPALAEEIVRAGSDNR
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCC
PTLAVAPSDAWN
CEEEECCCCCCC
>Mature Secondary Structure 
TGPVREPAAGTDFDGTRLTVARRLRRKTKAQLARELGISATAIAQYEKGQARPSSGVLN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
QICLSLGLPREFFGVSRPLTLLPASGAHFRSLRATPATSREQALAYGELSLELIDLISQY
HHHHHHCCCHHHHCCCCCCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VHLPPVRLPEVDIPDELTDDDIISAANGTRAAWNIAPGPVPSLVQTMEAHGIVVLRLPGD
HCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCC
TPHAVDAFSTFTARRPLVFLSPAKNDKGRSRFDAAHELGHLVLHPDTEPGSKLVEQQAHR
CCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
FASEFLMPRDQIISDLPRRIDWPKFHELKRHWGVSLRALVYRAHALGRLSEASYRRANQQ
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQWGLPEPGELGPAETPTLLGLVQTTMRDSGLDLHDILASSRIAPALAEEIVRAGSDNR
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCC
PTLAVAPSDAWN
CEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA