| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is mutA [H]
Identifier: 119717767
GI number: 119717767
Start: 3757951
End: 3759660
Strand: Reverse
Name: mutA [H]
Synonym: Noca_3545
Alternate gene names: 119717767
Gene position: 3759660-3757951 (Counterclockwise)
Preceding gene: 119717768
Following gene: 119717766
Centisome position: 75.41
GC content: 75.61
Gene sequence:
>1710_bases GTGGACGGTGGAGTGGAAGGCGGCCTCGACGAGCCGGCACGGCTCGAGCCTGAGCAGGGGTCGCTGGACCTCGCCTCCCC CGAGGACGCGTGGACGATCGCGGACTGGGAGAGGGGCGCGGCCGCCGTCCTGCGCAAGGCCCGCCGGTTGACCGACGAGG ACCCCGACGACCTGGTCTGGGAGAAGCTCACCCGGTCCACGCTGGACGGGATCGGGGTCACGCCGCTCGGGACCCGCGCC CTGCTCGACGAGGTGACGACGGTCGGACGCCCGACCCGCCAGGGCGACTGGGACGTGCGGGTGCAGGTCGACGGCGCCGA CGCGAAGACCGCGAACGAGGAGGTCCTCGTCGACCTCGAGGGCGGCGCCACCTCACTGTGGCTCCGGGGCGGGGCCGACC TGGGCACGCTCCTGGGGGGCGTCCGCCTCGACCTCGCGCCGGTGGTCCTCGACGGCGTCGACCCCACCGCCCTGCTCGCG TACGCCGAGGGTCGCGAGCTGCACCCGCTGACCAACCTCGGCGTCGCCGCGCAGGACGCCACCGCCGAGGCCGCCCGCCG CGCCGCCGACCGCGGGGTGCTCGGCTTCGTCGTCGACGCGACCACCGTCCACGACCGGGGCGGCTCGGACGTCCAGGAGC TCGCCTGGTCGATCGCCATCGGCGCGGCGTACCTGCGCACGCTCACGGACGAAGGCCTCCCGGTCGAGCAGGCGGCCGGC CTGGTCGAGTTCCGCTACGCGGCGACCGACGAGCAGTTCCCGACCATCGCGAAGCTCCGCGCGGCCCGCCGACTGTGGGC CCGGGTGCTCGAGCTCAGCGGGGCCGGCGACCTGTCCCAGCGCCAGCACGCGGTCACCAGCCGGCCGATGATGACGCGCT ACGACCCGTACGTGAACATGCTCCGCACCACGGTCGCGGCCTTCGCCGCCGGCGTGGGCGGCGCGGACGCCGTCACGGTG CTGCCCTTCGACGGCCCGCTGGGTCGCCCCGAGCAGCTCGGGCGCCGGATCGCGCGCAACACCTCGCACCTGCTGATCGA CGAGGCACACGTCGCGCACGTCGCGGACCCGGCCGGCGGCGCGTACGCCGTCGAGAAGCTCACCGACGACCTGGCGCTGG CGGCGTGGGATCTGTTCGGGCAGCTGGACGACGGTGCGCCGCTGGACGGCGCCATCGCCGAGACCGTCGCCCGGCGCGCG GCCGAGATCGCCCGGCGCAAGCGGCCGATCACCGGGCTGAGCGAGTTCCCGAACGCCGCCGAGGTGCTGCCCGAGCGGGC GCCGTACGACGGCTGGGACGGGGTGGCCTCCTACGGCGCCCCGTTCGAGGCACTGCGCGACGACCCGTCACCGACGCCGG TCTTCCTGGCCACGCTGGGCACCATCGCCGCCCACACGGCGCGGGCGACGTTCGCCACCAACCTGTTCGCCGCCGGCGGG ATCGGCGTCGAGGTTTCCGGTCCGACGGCCGACCCCGGTGAGGTGGTCGCGGCGTACGCCGGGCAGCCGGTGGTCTGCCT GGCCGGCTCGGACCCGACCTACGCCGAGTGGGGCGCCGAGGCGGCCGCGGCTCTGCGCGCCGCCGGCGCCCGGCACCTGA TCCTCGCCGGCAAGCCCGCCGGCCCGCTCGGCGAGGCGGTGGACGACTCCTGTGCACTCGGGGTCGACGCCTTGGACTTC CTGACCCGGACGAGGGAGAAGCTGTCGTGA
Upstream 100 bases:
>100_bases TGGGCCTGCGGCCGCGGGACCTAGGTCGTGACCTGCTCTCGAAAACGTCACATCGCGTGGCCCCGCGGTGTGCCGCACAC CTATCGTTCGGGGCATGAGT
Downstream 100 bases:
>100_bases CCGTCCCCAAGACCTTCCGCGGGCTGCCGCTCACCGGCGGCGCGGCGGGCGCCGCCGACGAGGGGGCCGACCGCACCTGG CTGGCCCCCGAAGGCATCGA
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MDGGVEGGLDEPARLEPEQGSLDLASPEDAWTIADWERGAAAVLRKARRLTDEDPDDLVWEKLTRSTLDGIGVTPLGTRA LLDEVTTVGRPTRQGDWDVRVQVDGADAKTANEEVLVDLEGGATSLWLRGGADLGTLLGGVRLDLAPVVLDGVDPTALLA YAEGRELHPLTNLGVAAQDATAEAARRAADRGVLGFVVDATTVHDRGGSDVQELAWSIAIGAAYLRTLTDEGLPVEQAAG LVEFRYAATDEQFPTIAKLRAARRLWARVLELSGAGDLSQRQHAVTSRPMMTRYDPYVNMLRTTVAAFAAGVGGADAVTV LPFDGPLGRPEQLGRRIARNTSHLLIDEAHVAHVADPAGGAYAVEKLTDDLALAAWDLFGQLDDGAPLDGAIAETVARRA AEIARRKRPITGLSEFPNAAEVLPERAPYDGWDGVASYGAPFEALRDDPSPTPVFLATLGTIAAHTARATFATNLFAAGG IGVEVSGPTADPGEVVAAYAGQPVVCLAGSDPTYAEWGAEAAAALRAAGARHLILAGKPAGPLGEAVDDSCALGVDALDF LTRTREKLS
Sequences:
>Translated_569_residues MDGGVEGGLDEPARLEPEQGSLDLASPEDAWTIADWERGAAAVLRKARRLTDEDPDDLVWEKLTRSTLDGIGVTPLGTRA LLDEVTTVGRPTRQGDWDVRVQVDGADAKTANEEVLVDLEGGATSLWLRGGADLGTLLGGVRLDLAPVVLDGVDPTALLA YAEGRELHPLTNLGVAAQDATAEAARRAADRGVLGFVVDATTVHDRGGSDVQELAWSIAIGAAYLRTLTDEGLPVEQAAG LVEFRYAATDEQFPTIAKLRAARRLWARVLELSGAGDLSQRQHAVTSRPMMTRYDPYVNMLRTTVAAFAAGVGGADAVTV LPFDGPLGRPEQLGRRIARNTSHLLIDEAHVAHVADPAGGAYAVEKLTDDLALAAWDLFGQLDDGAPLDGAIAETVARRA AEIARRKRPITGLSEFPNAAEVLPERAPYDGWDGVASYGAPFEALRDDPSPTPVFLATLGTIAAHTARATFATNLFAAGG IGVEVSGPTADPGEVVAAYAGQPVVCLAGSDPTYAEWGAEAAAALRAAGARHLILAGKPAGPLGEAVDDSCALGVDALDF LTRTREKLS >Mature_569_residues MDGGVEGGLDEPARLEPEQGSLDLASPEDAWTIADWERGAAAVLRKARRLTDEDPDDLVWEKLTRSTLDGIGVTPLGTRA LLDEVTTVGRPTRQGDWDVRVQVDGADAKTANEEVLVDLEGGATSLWLRGGADLGTLLGGVRLDLAPVVLDGVDPTALLA YAEGRELHPLTNLGVAAQDATAEAARRAADRGVLGFVVDATTVHDRGGSDVQELAWSIAIGAAYLRTLTDEGLPVEQAAG LVEFRYAATDEQFPTIAKLRAARRLWARVLELSGAGDLSQRQHAVTSRPMMTRYDPYVNMLRTTVAAFAAGVGGADAVTV LPFDGPLGRPEQLGRRIARNTSHLLIDEAHVAHVADPAGGAYAVEKLTDDLALAAWDLFGQLDDGAPLDGAIAETVARRA AEIARRKRPITGLSEFPNAAEVLPERAPYDGWDGVASYGAPFEALRDDPSPTPVFLATLGTIAAHTARATFATNLFAAGG IGVEVSGPTADPGEVVAAYAGQPVVCLAGSDPTYAEWGAEAAAALRAAGARHLILAGKPAGPLGEAVDDSCALGVDALDF LTRTREKLS
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=243, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI1789284, Length=222, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25144500, Length=232, Percent_Identity=33.1896551724138, Blast_Score=123, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 59595; Mature: 59595
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGGVEGGLDEPARLEPEQGSLDLASPEDAWTIADWERGAAAVLRKARRLTDEDPDDLVW CCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCHHCCHHHHHHHHHHCCCCCCHHHHH EKLTRSTLDGIGVTPLGTRALLDEVTTVGRPTRQGDWDVRVQVDGADAKTANEEVLVDLE HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEC GGATSLWLRGGADLGTLLGGVRLDLAPVVLDGVDPTALLAYAEGRELHPLTNLGVAAQDA CCCEEEEEECCCCHHHHHCCHHEEEEHEEECCCCHHHEEEECCCCCCCCHHCCCCCCCHH TAEAARRAADRGVLGFVVDATTVHDRGGSDVQELAWSIAIGAAYLRTLTDEGLPVEQAAG HHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC LVEFRYAATDEQFPTIAKLRAARRLWARVLELSGAGDLSQRQHAVTSRPMMTRYDPYVNM EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH LRTTVAAFAAGVGGADAVTVLPFDGPLGRPEQLGRRIARNTSHLLIDEAHVAHVADPAGG HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCHHHEECCCCCC AYAVEKLTDDLALAAWDLFGQLDDGAPLDGAIAETVARRAAEIARRKRPITGLSEFPNAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHH EVLPERAPYDGWDGVASYGAPFEALRDDPSPTPVFLATLGTIAAHTARATFATNLFAAGG HHCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC IGVEVSGPTADPGEVVAAYAGQPVVCLAGSDPTYAEWGAEAAAALRAAGARHLILAGKPA CEEEECCCCCCHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC GPLGEAVDDSCALGVDALDFLTRTREKLS CCCCHHCCCHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDGGVEGGLDEPARLEPEQGSLDLASPEDAWTIADWERGAAAVLRKARRLTDEDPDDLVW CCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCHHCCHHHHHHHHHHCCCCCCHHHHH EKLTRSTLDGIGVTPLGTRALLDEVTTVGRPTRQGDWDVRVQVDGADAKTANEEVLVDLE HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEC GGATSLWLRGGADLGTLLGGVRLDLAPVVLDGVDPTALLAYAEGRELHPLTNLGVAAQDA CCCEEEEEECCCCHHHHHCCHHEEEEHEEECCCCHHHEEEECCCCCCCCHHCCCCCCCHH TAEAARRAADRGVLGFVVDATTVHDRGGSDVQELAWSIAIGAAYLRTLTDEGLPVEQAAG HHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC LVEFRYAATDEQFPTIAKLRAARRLWARVLELSGAGDLSQRQHAVTSRPMMTRYDPYVNM EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH LRTTVAAFAAGVGGADAVTVLPFDGPLGRPEQLGRRIARNTSHLLIDEAHVAHVADPAGG HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCHHHEECCCCCC AYAVEKLTDDLALAAWDLFGQLDDGAPLDGAIAETVARRAAEIARRKRPITGLSEFPNAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHH EVLPERAPYDGWDGVASYGAPFEALRDDPSPTPVFLATLGTIAAHTARATFATNLFAAGG HHCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC IGVEVSGPTADPGEVVAAYAGQPVVCLAGSDPTYAEWGAEAAAALRAAGARHLILAGKPA CEEEECCCCCCHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC GPLGEAVDDSCALGVDALDFLTRTREKLS CCCCHHCCCHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]