| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717747
Identifier: 119717747
GI number: 119717747
Start: 3736478
End: 3736924
Strand: Reverse
Name: 119717747
Synonym: Noca_3525
Alternate gene names: NA
Gene position: 3736924-3736478 (Counterclockwise)
Preceding gene: 119717749
Following gene: 119717742
Centisome position: 74.95
GC content: 73.15
Gene sequence:
>447_bases GTGGGTCCGGTCTTCGCGTTCGGTGGTCGCTGGTTCGTCCCTGCGTCGCCGTCGGCGGTGCACGACGTGCTCGTCGACCT CGAGCACTACCCGGACTGGTGGCCGCAGGTGGTCGCCGTCGCGTCGCTGGGTCCCGACGACGCGCGGGTGCTGTGCCGCT CGGTGCTGCCCTACACCCTCGACCTGGTCCTGCACGCTGCGGACCGGTCGCCCTCCCGGCTCGAGGTCGGCGTCTCGGGG GACCTGATCGGGTCGGTCTGCTTCAAGCTGACGCCCGCCGACGACGGCCGCGGCACCCACCTCGACCTGGACCAGGAGGT CACCGTCCCTGGCCTGCTCGGGCTGGCGGCGTACGCCGCCGGTCCGGTGCTGCGCTGGAACCACCACCGGATGATGGCCG GGTGCGTGGCGGGTCTCTCCGCGCGGCTGAGCGCTCGATCGGGCTAG
Upstream 100 bases:
>100_bases TCGGCACGGGTCTGGTCGTCGGGGTCGTCGGCCACCCAGGCACGGGCGGTCCGGAGCAGGCTGCTCACATCGGCGGAGGT CATGAGGGCACGATACGAGG
Downstream 100 bases:
>100_bases CTGTCGATCGAGCTCATGTCGCCGTACCGCTCGCCGACGACCGCGCCGCGCGGGACCGCCTCGTCGAGAGCGGCCAGGTC GGCCCCGGTCAGCTCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGPVFAFGGRWFVPASPSAVHDVLVDLEHYPDWWPQVVAVASLGPDDARVLCRSVLPYTLDLVLHAADRSPSRLEVGVSG DLIGSVCFKLTPADDGRGTHLDLDQEVTVPGLLGLAAYAAGPVLRWNHHRMMAGCVAGLSARLSARSG
Sequences:
>Translated_148_residues MGPVFAFGGRWFVPASPSAVHDVLVDLEHYPDWWPQVVAVASLGPDDARVLCRSVLPYTLDLVLHAADRSPSRLEVGVSG DLIGSVCFKLTPADDGRGTHLDLDQEVTVPGLLGLAAYAAGPVLRWNHHRMMAGCVAGLSARLSARSG >Mature_147_residues GPVFAFGGRWFVPASPSAVHDVLVDLEHYPDWWPQVVAVASLGPDDARVLCRSVLPYTLDLVLHAADRSPSRLEVGVSGD LIGSVCFKLTPADDGRGTHLDLDQEVTVPGLLGLAAYAAGPVLRWNHHRMMAGCVAGLSARLSARSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15738; Mature: 15607
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVFAFGGRWFVPASPSAVHDVLVDLEHYPDWWPQVVAVASLGPDDARVLCRSVLPYTL CCCEEEECCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH DLVLHAADRSPSRLEVGVSGDLIGSVCFKLTPADDGRGTHLDLDQEVTVPGLLGLAAYAA HHHHHHCCCCCCEEEECCCCHHHHHHHEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHC GPVLRWNHHRMMAGCVAGLSARLSARSG CCEEEECCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GPVFAFGGRWFVPASPSAVHDVLVDLEHYPDWWPQVVAVASLGPDDARVLCRSVLPYTL CCEEEECCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH DLVLHAADRSPSRLEVGVSGDLIGSVCFKLTPADDGRGTHLDLDQEVTVPGLLGLAAYAA HHHHHHCCCCCCEEEECCCCHHHHHHHEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHC GPVLRWNHHRMMAGCVAGLSARLSARSG CCEEEECCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA