Click here to switch to the map view.

The map label for this gene is 119717675

Identifier: 119717675

GI number: 119717675

Start: 3662369

End: 3663079

Strand: Reverse

Name: 119717675

Synonym: Noca_3453

Alternate gene names: NA

Gene position: 3663079-3662369 (Counterclockwise)

Preceding gene: 119717676

Following gene: 119717674

Centisome position: 73.47

GC content: 75.53

Gene sequence:

>711_bases
GTGCGCGACCAGCCCGAGCAGCAAGCCCCACCCGTCCAGCGGCTGCGGATCCGCTACGCCAAGCGCGGCCGGCTCCGGTT
CACCAGCCACCGCGACTTCAGCCGGGCCTTCGAGCGGGCGGTCTTCCGCGCGCGGGTCCCGATGGCCTACTCCTCGGGGT
TCAACCCGCACCCGCGGATCTCGTACGCCGGCGCTGCGCCCACCGGGTCCGCGAGCGAGGCCGAGTACCTCGAGATCGGG
CTGGCCGAGGTCCGCGACCCCGCAACCGTGCGCGCCGCCCTGGAGGAGGCGCTGCCCGACGGCCTCGACGTCGTCGAGGT
GGTGGAAGCCGCCGGGGGCTCCCTCGCGGACCTCCTGGAGGCGAGCCACTGGCTGCTCGACCTCGAGGTCGCTCCGGAGG
TCACCGGCCCGGCTGTCACGACCTTCCTTGCGGCGGAGGCCGTGCCGGTGCAGCGGATGACCAAGAAGGGGCTGCGCGAC
TTCGACTGCCGCGCGGCCGTGATCGCGCTCGCCGCGGAGCCGCACGGGACCGGCACCCGCCTCGACCTGGTGCTCCGGCA
CGGCGTCCCGTCGGTGCGCCCGGACGACGTGCTGGCCGGACTGACCGCGGTCTCCGGCCTCGAGATGCCCGGCGCCCCGC
TGCTCACCCGGCTCGCCCAGGGCCCGCTCGACCCCACCACCGGAGAGATCGGCGACCCGCTGGGCGGCTGA

Upstream 100 bases:

>100_bases
CCCGGCTGACCGCGTGGCTGGGAGGCGATCGGGTCAGCACGGTCTACCCGTCTGCGGCGATGAAGCAGGCCGTCGCGCGC
TGAACCCGTAGCCTTGACCG

Downstream 100 bases:

>100_bases
CGGTGACGGCCACCACCGCGACGTGTGCGATACTCGCAGGGATCGGCCCGGGCAACCTGCCCGGAACGGTACGACGACGT
TCTCGCCGGCCCACCCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Fe-S Oxidoreductase; Elongator /MiaB/NifB; Radical SAM Domain Protein; Radical Sam Protein; LOW QUALITY PROTEIN Fe-S Oxidoreductase; Radical SAM Family Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRDQPEQQAPPVQRLRIRYAKRGRLRFTSHRDFSRAFERAVFRARVPMAYSSGFNPHPRISYAGAAPTGSASEAEYLEIG
LAEVRDPATVRAALEEALPDGLDVVEVVEAAGGSLADLLEASHWLLDLEVAPEVTGPAVTTFLAAEAVPVQRMTKKGLRD
FDCRAAVIALAAEPHGTGTRLDLVLRHGVPSVRPDDVLAGLTAVSGLEMPGAPLLTRLAQGPLDPTTGEIGDPLGG

Sequences:

>Translated_236_residues
MRDQPEQQAPPVQRLRIRYAKRGRLRFTSHRDFSRAFERAVFRARVPMAYSSGFNPHPRISYAGAAPTGSASEAEYLEIG
LAEVRDPATVRAALEEALPDGLDVVEVVEAAGGSLADLLEASHWLLDLEVAPEVTGPAVTTFLAAEAVPVQRMTKKGLRD
FDCRAAVIALAAEPHGTGTRLDLVLRHGVPSVRPDDVLAGLTAVSGLEMPGAPLLTRLAQGPLDPTTGEIGDPLGG
>Mature_236_residues
MRDQPEQQAPPVQRLRIRYAKRGRLRFTSHRDFSRAFERAVFRARVPMAYSSGFNPHPRISYAGAAPTGSASEAEYLEIG
LAEVRDPATVRAALEEALPDGLDVVEVVEAAGGSLADLLEASHWLLDLEVAPEVTGPAVTTFLAAEAVPVQRMTKKGLRD
FDCRAAVIALAAEPHGTGTRLDLVLRHGVPSVRPDDVLAGLTAVSGLEMPGAPLLTRLAQGPLDPTTGEIGDPLGG

Specific function: Unknown

COG id: COG5011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25144; Mature: 25144

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDQPEQQAPPVQRLRIRYAKRGRLRFTSHRDFSRAFERAVFRARVPMAYSSGFNPHPRI
CCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCE
SYAGAAPTGSASEAEYLEIGLAEVRDPATVRAALEEALPDGLDVVEVVEAAGGSLADLLE
EECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
ASHWLLDLEVAPEVTGPAVTTFLAAEAVPVQRMTKKGLRDFDCRAAVIALAAEPHGTGTR
HHHHEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHEEEEEECCCCCCCCC
LDLVLRHGVPSVRPDDVLAGLTAVSGLEMPGAPLLTRLAQGPLDPTTGEIGDPLGG
EEHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDQPEQQAPPVQRLRIRYAKRGRLRFTSHRDFSRAFERAVFRARVPMAYSSGFNPHPRI
CCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCE
SYAGAAPTGSASEAEYLEIGLAEVRDPATVRAALEEALPDGLDVVEVVEAAGGSLADLLE
EECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
ASHWLLDLEVAPEVTGPAVTTFLAAEAVPVQRMTKKGLRDFDCRAAVIALAAEPHGTGTR
HHHHEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHEEEEEECCCCCCCCC
LDLVLRHGVPSVRPDDVLAGLTAVSGLEMPGAPLLTRLAQGPLDPTTGEIGDPLGG
EEHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA