| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717645
Identifier: 119717645
GI number: 119717645
Start: 3627856
End: 3628353
Strand: Reverse
Name: 119717645
Synonym: Noca_3423
Alternate gene names: NA
Gene position: 3628353-3627856 (Counterclockwise)
Preceding gene: 119717646
Following gene: 119717644
Centisome position: 72.77
GC content: 70.68
Gene sequence:
>498_bases GTGACCCGAGACCCAGGAGGACACGACATGGGTGGTTACGACGTCGTCCGCACGACCGACATCGCGGCGGACCCGGCCCG GGTGCACGCCCTGGTCGACGACTTCCAGGAGTGGACCACCTGGTCGCCGTGGGAGGACCTGGACCCCGCGCTGGAACGCA CCTACACCGGGCCGGATGCCGGCGTCGGTGCCCACTACGCCTGGCGCGGCAACCGCAAGGCCGGCGCCGGTAGCATGGAG ATCACCGGATCGACGCCCGAGCGGATCGACATCCAGCTGGTCTTCCAGAAGCCGTTCGCCGCCGTCAACCCGGTCGCGTT CACCTTCACCCCCACCCAGGTCGGTGGCGCGCCCGGCACCCACGTCGAGTGGCGGATGCGCGGGGAGCCGAAGGGCCTGT GGGGCCTGGTCGGCCGGCTGCTGCCGATGGACAAGATGGTCGGCAAGGACTTCGACAAGGGGCTGGCCCGGCTCAAGGGG GTCGCCGAGCAGCCTTGA
Upstream 100 bases:
>100_bases GGCGCCGTCTGGGGCTCGGCCGACGAGGGCGAGACCTGGCGCCAGGTCGTCTGCGACCTGCCCGACGTGATGGTGGTCCG CGCCGCCGCGATCTGAGACG
Downstream 100 bases:
>100_bases GGCCCCGGTAGGTAGAACTGCCGCTCCCTCGGGGACCTTCGACGGTGGCGCCCGGTCTCGCGGAGGCGTAGAGCGGGGCT GGGGAGCGCTGGGGATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Transcriptional Regulator; DoxX Family Domain-Containing Protein; DoxX Family Protein; Polyketide Cyclase / Dehydrase And Lipid Transport
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTRDPGGHDMGGYDVVRTTDIAADPARVHALVDDFQEWTTWSPWEDLDPALERTYTGPDAGVGAHYAWRGNRKAGAGSME ITGSTPERIDIQLVFQKPFAAVNPVAFTFTPTQVGGAPGTHVEWRMRGEPKGLWGLVGRLLPMDKMVGKDFDKGLARLKG VAEQP
Sequences:
>Translated_165_residues MTRDPGGHDMGGYDVVRTTDIAADPARVHALVDDFQEWTTWSPWEDLDPALERTYTGPDAGVGAHYAWRGNRKAGAGSME ITGSTPERIDIQLVFQKPFAAVNPVAFTFTPTQVGGAPGTHVEWRMRGEPKGLWGLVGRLLPMDKMVGKDFDKGLARLKG VAEQP >Mature_164_residues TRDPGGHDMGGYDVVRTTDIAADPARVHALVDDFQEWTTWSPWEDLDPALERTYTGPDAGVGAHYAWRGNRKAGAGSMEI TGSTPERIDIQLVFQKPFAAVNPVAFTFTPTQVGGAPGTHVEWRMRGEPKGLWGLVGRLLPMDKMVGKDFDKGLARLKGV AEQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18019; Mature: 17887
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDPGGHDMGGYDVVRTTDIAADPARVHALVDDFQEWTTWSPWEDLDPALERTYTGPDA CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC GVGAHYAWRGNRKAGAGSMEITGSTPERIDIQLVFQKPFAAVNPVAFTFTPTQVGGAPGT CCCCEEEECCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCHHCCCCCCC HVEWRMRGEPKGLWGLVGRLLPMDKMVGKDFDKGLARLKGVAEQP CEEEEECCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TRDPGGHDMGGYDVVRTTDIAADPARVHALVDDFQEWTTWSPWEDLDPALERTYTGPDA CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC GVGAHYAWRGNRKAGAGSMEITGSTPERIDIQLVFQKPFAAVNPVAFTFTPTQVGGAPGT CCCCEEEECCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCHHCCCCCCC HVEWRMRGEPKGLWGLVGRLLPMDKMVGKDFDKGLARLKGVAEQP CEEEEECCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA