| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717489
Identifier: 119717489
GI number: 119717489
Start: 3466919
End: 3467287
Strand: Reverse
Name: 119717489
Synonym: Noca_3265
Alternate gene names: NA
Gene position: 3467287-3466919 (Counterclockwise)
Preceding gene: 119717490
Following gene: 119717487
Centisome position: 69.54
GC content: 75.34
Gene sequence:
>369_bases GTGACCTCGGTCCTCGTGGTCGGCGCCGCGAATGTGGTGGGTAGCAGACCGGACGGCTGGTGGAAGGACCGGGCCGGAGC GGCCCGCCGGCTGCACGAGCGGCTGCTGGTCGCGGACCCGTCGTACGACGAGGTGGTGCTGGTCCTCGAGGGTGCCGCCA AGGCCGGTGTCCGCGCCGGCCGCGACGGCCACGTCCGGACCGTGCACGCCAAGGGGCACGGCGACGACACGATCCTCGAG CAGGCCCGCGCCGCCGCCGAGCGCGGCGACCGGGTGGCGGTCGTCACGGCCGACCGGATGCTCCAGGCCAGGGTCCAGGG GGTCGGCGCGGTCGCGCTCGGCCCGTCCTGGCTTCTCGACCAGATCTAG
Upstream 100 bases:
>100_bases TGGTCGCTTCGCTCCCCGCTCCTTCGTTCCGCCCAACCAGGCTCGCTGCGCTCGCGGTTCGGCGGGCGAGCTTGGCTCGC GGTGCCCGCAGGTGGCTCCG
Downstream 100 bases:
>100_bases CCAGCACGCTGGGCGCCCGGTCAGACGCTGACCCGGGCGATCGCCAACGACACCGCACCGACGAGCTCGGCGCGGTCGCC CAGGGCACCCGGGACCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTSVLVVGAANVVGSRPDGWWKDRAGAARRLHERLLVADPSYDEVVLVLEGAAKAGVRAGRDGHVRTVHAKGHGDDTILE QARAAAERGDRVAVVTADRMLQARVQGVGAVALGPSWLLDQI
Sequences:
>Translated_122_residues MTSVLVVGAANVVGSRPDGWWKDRAGAARRLHERLLVADPSYDEVVLVLEGAAKAGVRAGRDGHVRTVHAKGHGDDTILE QARAAAERGDRVAVVTADRMLQARVQGVGAVALGPSWLLDQI >Mature_121_residues TSVLVVGAANVVGSRPDGWWKDRAGAARRLHERLLVADPSYDEVVLVLEGAAKAGVRAGRDGHVRTVHAKGHGDDTILEQ ARAAAERGDRVAVVTADRMLQARVQGVGAVALGPSWLLDQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12909; Mature: 12778
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVLVVGAANVVGSRPDGWWKDRAGAARRLHERLLVADPSYDEVVLVLEGAAKAGVRAG CCEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCC RDGHVRTVHAKGHGDDTILEQARAAAERGDRVAVVTADRMLQARVQGVGAVALGPSWLLD CCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCEEEECCHHHHH QI CC >Mature Secondary Structure TSVLVVGAANVVGSRPDGWWKDRAGAARRLHERLLVADPSYDEVVLVLEGAAKAGVRAG CEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCC RDGHVRTVHAKGHGDDTILEQARAAAERGDRVAVVTADRMLQARVQGVGAVALGPSWLLD CCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCEEEECCHHHHH QI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA