| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717486
Identifier: 119717486
GI number: 119717486
Start: 3462411
End: 3463496
Strand: Reverse
Name: 119717486
Synonym: Noca_3262
Alternate gene names: NA
Gene position: 3463496-3462411 (Counterclockwise)
Preceding gene: 119717487
Following gene: 119717484
Centisome position: 69.47
GC content: 73.57
Gene sequence:
>1086_bases ATGGCTGCGTCGACACCCGCGCTGCGGTTCTCGGGACCCGTGCTACCGGACGGAGAGCCCCGGACCTTCTACGTCCGCGA CGGCCGGGTGACCTACCAGCCGACGGCCGGCTCGGAGCACGCCGCCGACGGCTGGATCGTGCCCGGCCTGGTGGACGCCC ACTGCCACCTCGGGTTGGGGGAGGACGGGCCGATCAGCGACGACGAGACCGAGCAGCAGGCCCTGGAGGATCGCGACGGT GGCACGCTGCTGATCCGCGACTGCGGCTCGCCCGTCGACACCCGGTGGGTCCAGGAGCGCGACGACCTGCCGCGGCTCAT CCGCGCCGGCCGGCACCTCGCGCGCACCCGGCGATACCTGCGCAACTATGCACACGAGGTCGAGCCCGGCGAGCTGTCGG CGCACGTCGCCGAGCAGGCGCGGCGCGGGGACGGGTGGGTCAAGCTGGTCGGCGACTGGATCTCGCGCGACGACGGCGAC CTGATGCCGTCCTTCCCGCGCGAGACGTTCGCCGAGGCCATCGCGGTGGCTCACGACCACGGTGCCAGGGTGACCGCGCA CTGCTTCGGCCGTGACGTGCTCAGAGGCCTGCTCGAGGCCGGGATCGACTGCGTCGAGCACGGCACCGGCCTCGACGAGT CCCACCTCGCGCTGATGGTCGAGCGCGGGGTGGCGCTCGTGCCGACGGTGATGCAGACCGAGAAGTTCCCGGAGTACGCC TGGTCGGCGCGGGGGAAGTTCCCCGACTACGCCCGCACGATGACCGACCTGTTCCTGCGCCGCCGGGCCACGCTGATGGC GGCGTACGACGCGGGCGTCGCGCTCTACGCCGGGTCGGACAACGGCGGGGTCAGCAGGCACGGCAACCTGGCCGGCGAGG TGATCGCGATGACCGCCCTCGGGCTGCCGGCCGAGTACGCGCTCGGCGCCGCCTCGTGGCGCGCCCGGGAGTGGCTGGGC TGGAACGCCGGCCTCGACGAGGGCGCACCCGCGGACTTCGTCGTCTACGACGCCGACCCGCTCGTGGATCTCTCCGTGCT GCTGAGCCCGGCGCGGGTGGTGCTGCGCGGGCGGGTCGTCGCCTGA
Upstream 100 bases:
>100_bases CCCGCTCTACCGCTTCGGCTACGGCCTGCGCACCCGCTGACCACGGACCAGCGGGGGCCCTGCCCCGGACGCACCCCACT TGACCGGTAGCGTCCGGGGC
Downstream 100 bases:
>100_bases GCCGTCCCTCAGACCCGCCGGTCCACGAGCTGCAACGTGCCCTGGTTCACGCGGAACCAGCGCGGCCACACGGCGTCGTC GCCGATCTGGATGAGCAGCT
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAASTPALRFSGPVLPDGEPRTFYVRDGRVTYQPTAGSEHAADGWIVPGLVDAHCHLGLGEDGPISDDETEQQALEDRDG GTLLIRDCGSPVDTRWVQERDDLPRLIRAGRHLARTRRYLRNYAHEVEPGELSAHVAEQARRGDGWVKLVGDWISRDDGD LMPSFPRETFAEAIAVAHDHGARVTAHCFGRDVLRGLLEAGIDCVEHGTGLDESHLALMVERGVALVPTVMQTEKFPEYA WSARGKFPDYARTMTDLFLRRRATLMAAYDAGVALYAGSDNGGVSRHGNLAGEVIAMTALGLPAEYALGAASWRAREWLG WNAGLDEGAPADFVVYDADPLVDLSVLLSPARVVLRGRVVA
Sequences:
>Translated_361_residues MAASTPALRFSGPVLPDGEPRTFYVRDGRVTYQPTAGSEHAADGWIVPGLVDAHCHLGLGEDGPISDDETEQQALEDRDG GTLLIRDCGSPVDTRWVQERDDLPRLIRAGRHLARTRRYLRNYAHEVEPGELSAHVAEQARRGDGWVKLVGDWISRDDGD LMPSFPRETFAEAIAVAHDHGARVTAHCFGRDVLRGLLEAGIDCVEHGTGLDESHLALMVERGVALVPTVMQTEKFPEYA WSARGKFPDYARTMTDLFLRRRATLMAAYDAGVALYAGSDNGGVSRHGNLAGEVIAMTALGLPAEYALGAASWRAREWLG WNAGLDEGAPADFVVYDADPLVDLSVLLSPARVVLRGRVVA >Mature_360_residues AASTPALRFSGPVLPDGEPRTFYVRDGRVTYQPTAGSEHAADGWIVPGLVDAHCHLGLGEDGPISDDETEQQALEDRDGG TLLIRDCGSPVDTRWVQERDDLPRLIRAGRHLARTRRYLRNYAHEVEPGELSAHVAEQARRGDGWVKLVGDWISRDDGDL MPSFPRETFAEAIAVAHDHGARVTAHCFGRDVLRGLLEAGIDCVEHGTGLDESHLALMVERGVALVPTVMQTEKFPEYAW SARGKFPDYARTMTDLFLRRRATLMAAYDAGVALYAGSDNGGVSRHGNLAGEVIAMTALGLPAEYALGAASWRAREWLGW NAGLDEGAPADFVVYDADPLVDLSVLLSPARVVLRGRVVA
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 39272; Mature: 39141
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASTPALRFSGPVLPDGEPRTFYVRDGRVTYQPTAGSEHAADGWIVPGLVDAHCHLGLG CCCCCCCEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCEECCCEECCCC EDGPISDDETEQQALEDRDGGTLLIRDCGSPVDTRWVQERDDLPRLIRAGRHLARTRRYL CCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RNYAHEVEPGELSAHVAEQARRGDGWVKLVGDWISRDDGDLMPSFPRETFAEAIAVAHDH HHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCC GARVTAHCFGRDVLRGLLEAGIDCVEHGTGLDESHLALMVERGVALVPTVMQTEKFPEYA CCEEEHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHH WSARGKFPDYARTMTDLFLRRRATLMAAYDAGVALYAGSDNGGVSRHGNLAGEVIAMTAL HHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHH GLPAEYALGAASWRAREWLGWNAGLDEGAPADFVVYDADPLVDLSVLLSPARVVLRGRVV CCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC A C >Mature Secondary Structure AASTPALRFSGPVLPDGEPRTFYVRDGRVTYQPTAGSEHAADGWIVPGLVDAHCHLGLG CCCCCCEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCEECCCEECCCC EDGPISDDETEQQALEDRDGGTLLIRDCGSPVDTRWVQERDDLPRLIRAGRHLARTRRYL CCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RNYAHEVEPGELSAHVAEQARRGDGWVKLVGDWISRDDGDLMPSFPRETFAEAIAVAHDH HHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCC GARVTAHCFGRDVLRGLLEAGIDCVEHGTGLDESHLALMVERGVALVPTVMQTEKFPEYA CCEEEHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHH WSARGKFPDYARTMTDLFLRRRATLMAAYDAGVALYAGSDNGGVSRHGNLAGEVIAMTAL HHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHH GLPAEYALGAASWRAREWLGWNAGLDEGAPADFVVYDADPLVDLSVLLSPARVVLRGRVV CCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]