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The map label for this gene is ydfJ [H]

Identifier: 119717088

GI number: 119717088

Start: 3041311

End: 3043458

Strand: Reverse

Name: ydfJ [H]

Synonym: Noca_2864

Alternate gene names: 119717088

Gene position: 3043458-3041311 (Counterclockwise)

Preceding gene: 119717089

Following gene: 119717085

Centisome position: 61.04

GC content: 74.49

Gene sequence:

>2148_bases
GTGAACCGCATCCTCTACCGCCTCGGCGCCGGCGCCGCGGCGCACCCGTGGCGGACGATCTCCGCCTGGGTGGCCGTGGT
CGTCGTCGCCTTCGGGCTCGCCGGCGCCCTCGGCGGCACCACCCACGACGACTACGACATCCCCGGCGCCCGGGCCCAGG
TGGGCATCGAGCAGCTGCGCGCCCACGTGCCCGACGGCGGTGGCGCCACCGCGCAGGTCGTCGTGCACGACCCGAGCGGC
GCCGCCCTGGACCCGGCCGACCTGACCGGCCTGGTCCAGCGGCTGCACCGCCTCGACCACGCCAGCTACGTCACCGAACC
GCGGGTCTCCGCCGACGGCGACACCGCGCTCGTCACCGTGTCGTACGACGCCCCCGTCACCGACTCCGACCTGGTCGGCG
CGAACGGCTACGACCCGCTCGTCGACGCCATCGCGCCGCTGCGCGCCGACGGCCTGCAGGCCGAGCTCGGCGGCGAGCTG
CCCGGCGGCGCCGAGTCGCAGATGAGCGGCACCGGCGAGATCGCCGGCGTGATCGCCGCGCTCGTGCTGCTGGTCGTCGC
GTTCGGCTCGGTGGTGGCCGCCGGCCTGCCGCTGGTGATCGCCCTGATGGGCCTGGCCGTCGGGTCCGCGGGCGTCACCC
TGCTCGCCGCGACCATGGACGTCAGCACCGCGGCTCCCACGGTCGCCACCATGGTCGGCCTGGGCGTCGGCATCGACTAC
GCGCTGCTGCTGGTCACCCGGCACGTGGAGTTCCTGGGCCGGGGCCTGGACAAGCGCGACGCCGCCGGCCGCGCGATGGC
GACCGCCGGCCGGTCGGTCGTGTTCGCCTCGGCCACCGTGCTGATCTCGCTGATGGGGCTGCGCCTGGGCGGGCTGCCGG
TCTACGCCACGTTCGGCTACGCCACCGCGCTCGCCGTGGTGGCCGTGCTGGCCGCGGCGATCACGCTGGTGCCGGCCCTG
TGCGGGTTGGCGGGCCGGCGGCTGCTCCCGCGGCGTACCCGCACCGGGCGCAGCGCCCGCGGCGCCAAGGCCCCGCTCAC
GGCCCGCTGGGCCGCCCGGGTCGCCCGGCGGCCCGTCGTCGCCGCGCTGGCGGCACTGATGTTCCTGCTGCTGCTCGCCG
CCCCCACCCTGGGCATGCGCACCTGGCCGCAGGACGGCAGCAGCAACAGCCCGTCCACCTCCGTGCGCCGGGCCTACGAC
CTCATCGCGGAGGAGTACGGCGCCGGCGCGAACGGACCGTTCACGATCGTCGTCGACACCACCCGCGCCGACGCGGGGGA
CGTGGCCGACCGGGTCGCCGACCACGCCGGCATCGCCGGGGTCACCGTCCCCGTCACCTCGCCGGACGGTGCGATCGCCC
TCTTCGACGCGGAGCCCACCACCGGCCCCGCCGACGAGCGCACCTCCGACCTCGTCGCGACCCTGCGGGCCGACCTCCCG
GCGGGCGTCGAGGTCACCGGCACCACGCCGATCTTCGCCGACATCTCCGCGATGCTCTCGAGCCGGCTGTGGCTGGTCGT
CGGGTTCGTGGTCGCGGTCTCCGTGCTGCTGCTCGCGATGATGTTCCGCTCCGTGGTCGTGCCGGTGAAGGCCGCCGTGA
TGAACCTGCTCTCGATCGGAGCGTCGTACGGCGTCCTCACCGCGGTGTTCCAGTGGGGCTGGGGCGGGAGCGTGCTCGGC
ATCGACCACGCGGTCGCCGTCTCGAGCTGGATCCCGATCCTGAACTTCGCGATCCTGTTCGGGCTCTCGATGGACTACGA
GGTGTTCCTGCTCTCCCGGATCCGCGAGGAGTGGCTGCGCACCGGCGACGCCCGGGGCAGCGTGGAGCGCGGCCTGGCTT
CGACCGGCCGGGTGATCTCCTCGGCCGCCGCGATCATGGTCGTCGTCTTCCTCGGGTTCTCCACCGAGGCCGACACCGTG
GTCAAGCAGCTCGGCTTCGGCATGGCGGTGGCGATCGTGCTCGACGCCACCGTGGTCCGGATGGTGCTCGTCCCCGCGAC
GATGACCCTCCTCGGCCGGTGGAACTGGTGGCTGCCCGCGTGGCTGGACCGCCTGCTCCCGACCATCGAGGCCGAGCGGC
ACGAGTCCGACGACGAGATCTGGGGCGACTTCGACCAGACCGACCAGCGCACGCCGGCCGGCGTCTGA

Upstream 100 bases:

>100_bases
CGGCGGGTCGCCCGATCCCAAGCCGACTCCCAGTCGGTCTCAAGCAGCGCGGCGCACGCTGCTCCCACCGATCAAGCAGA
CCTCATCCAGGGAGCAGCAC

Downstream 100 bases:

>100_bases
CCCGGGCCCGAGCTCGGCGACCGAGGAGGGACCAGATGACCACGCGCAGCAGCGGCGCCTGGCCGCGGCAGCTCCGAGAC
CGGGGGGTCGGTTTCCCCGG

Product: MMPL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 715; Mature: 715

Protein sequence:

>715_residues
MNRILYRLGAGAAAHPWRTISAWVAVVVVAFGLAGALGGTTHDDYDIPGARAQVGIEQLRAHVPDGGGATAQVVVHDPSG
AALDPADLTGLVQRLHRLDHASYVTEPRVSADGDTALVTVSYDAPVTDSDLVGANGYDPLVDAIAPLRADGLQAELGGEL
PGGAESQMSGTGEIAGVIAALVLLVVAFGSVVAAGLPLVIALMGLAVGSAGVTLLAATMDVSTAAPTVATMVGLGVGIDY
ALLLVTRHVEFLGRGLDKRDAAGRAMATAGRSVVFASATVLISLMGLRLGGLPVYATFGYATALAVVAVLAAAITLVPAL
CGLAGRRLLPRRTRTGRSARGAKAPLTARWAARVARRPVVAALAALMFLLLLAAPTLGMRTWPQDGSSNSPSTSVRRAYD
LIAEEYGAGANGPFTIVVDTTRADAGDVADRVADHAGIAGVTVPVTSPDGAIALFDAEPTTGPADERTSDLVATLRADLP
AGVEVTGTTPIFADISAMLSSRLWLVVGFVVAVSVLLLAMMFRSVVVPVKAAVMNLLSIGASYGVLTAVFQWGWGGSVLG
IDHAVAVSSWIPILNFAILFGLSMDYEVFLLSRIREEWLRTGDARGSVERGLASTGRVISSAAAIMVVVFLGFSTEADTV
VKQLGFGMAVAIVLDATVVRMVLVPATMTLLGRWNWWLPAWLDRLLPTIEAERHESDDEIWGDFDQTDQRTPAGV

Sequences:

>Translated_715_residues
MNRILYRLGAGAAAHPWRTISAWVAVVVVAFGLAGALGGTTHDDYDIPGARAQVGIEQLRAHVPDGGGATAQVVVHDPSG
AALDPADLTGLVQRLHRLDHASYVTEPRVSADGDTALVTVSYDAPVTDSDLVGANGYDPLVDAIAPLRADGLQAELGGEL
PGGAESQMSGTGEIAGVIAALVLLVVAFGSVVAAGLPLVIALMGLAVGSAGVTLLAATMDVSTAAPTVATMVGLGVGIDY
ALLLVTRHVEFLGRGLDKRDAAGRAMATAGRSVVFASATVLISLMGLRLGGLPVYATFGYATALAVVAVLAAAITLVPAL
CGLAGRRLLPRRTRTGRSARGAKAPLTARWAARVARRPVVAALAALMFLLLLAAPTLGMRTWPQDGSSNSPSTSVRRAYD
LIAEEYGAGANGPFTIVVDTTRADAGDVADRVADHAGIAGVTVPVTSPDGAIALFDAEPTTGPADERTSDLVATLRADLP
AGVEVTGTTPIFADISAMLSSRLWLVVGFVVAVSVLLLAMMFRSVVVPVKAAVMNLLSIGASYGVLTAVFQWGWGGSVLG
IDHAVAVSSWIPILNFAILFGLSMDYEVFLLSRIREEWLRTGDARGSVERGLASTGRVISSAAAIMVVVFLGFSTEADTV
VKQLGFGMAVAIVLDATVVRMVLVPATMTLLGRWNWWLPAWLDRLLPTIEAERHESDDEIWGDFDQTDQRTPAGV
>Mature_715_residues
MNRILYRLGAGAAAHPWRTISAWVAVVVVAFGLAGALGGTTHDDYDIPGARAQVGIEQLRAHVPDGGGATAQVVVHDPSG
AALDPADLTGLVQRLHRLDHASYVTEPRVSADGDTALVTVSYDAPVTDSDLVGANGYDPLVDAIAPLRADGLQAELGGEL
PGGAESQMSGTGEIAGVIAALVLLVVAFGSVVAAGLPLVIALMGLAVGSAGVTLLAATMDVSTAAPTVATMVGLGVGIDY
ALLLVTRHVEFLGRGLDKRDAAGRAMATAGRSVVFASATVLISLMGLRLGGLPVYATFGYATALAVVAVLAAAITLVPAL
CGLAGRRLLPRRTRTGRSARGAKAPLTARWAARVARRPVVAALAALMFLLLLAAPTLGMRTWPQDGSSNSPSTSVRRAYD
LIAEEYGAGANGPFTIVVDTTRADAGDVADRVADHAGIAGVTVPVTSPDGAIALFDAEPTTGPADERTSDLVATLRADLP
AGVEVTGTTPIFADISAMLSSRLWLVVGFVVAVSVLLLAMMFRSVVVPVKAAVMNLLSIGASYGVLTAVFQWGWGGSVLG
IDHAVAVSSWIPILNFAILFGLSMDYEVFLLSRIREEWLRTGDARGSVERGLASTGRVISSAAAIMVVVFLGFSTEADTV
VKQLGFGMAVAIVLDATVVRMVLVPATMTLLGRWNWWLPAWLDRLLPTIEAERHESDDEIWGDFDQTDQRTPAGV

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 74093; Mature: 74093

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRILYRLGAGAAAHPWRTISAWVAVVVVAFGLAGALGGTTHDDYDIPGARAQVGIEQLR
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AHVPDGGGATAQVVVHDPSGAALDPADLTGLVQRLHRLDHASYVTEPRVSADGDTALVTV
HHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
SYDAPVTDSDLVGANGYDPLVDAIAPLRADGLQAELGGELPGGAESQMSGTGEIAGVIAA
EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHH
LVLLVVAFGSVVAAGLPLVIALMGLAVGSAGVTLLAATMDVSTAAPTVATMVGLGVGIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHCCHHH
ALLLVTRHVEFLGRGLDKRDAAGRAMATAGRSVVFASATVLISLMGLRLGGLPVYATFGY
HHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ATALAVVAVLAAAITLVPALCGLAGRRLLPRRTRTGRSARGAKAPLTARWAARVARRPVV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHH
AALAALMFLLLLAAPTLGMRTWPQDGSSNSPSTSVRRAYDLIAEEYGAGANGPFTIVVDT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
TRADAGDVADRVADHAGIAGVTVPVTSPDGAIALFDAEPTTGPADERTSDLVATLRADLP
CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC
AGVEVTGTTPIFADISAMLSSRLWLVVGFVVAVSVLLLAMMFRSVVVPVKAAVMNLLSIG
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASYGVLTAVFQWGWGGSVLGIDHAVAVSSWIPILNFAILFGLSMDYEVFLLSRIREEWLR
CHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TGDARGSVERGLASTGRVISSAAAIMVVVFLGFSTEADTVVKQLGFGMAVAIVLDATVVR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
MVLVPATMTLLGRWNWWLPAWLDRLLPTIEAERHESDDEIWGDFDQTDQRTPAGV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRILYRLGAGAAAHPWRTISAWVAVVVVAFGLAGALGGTTHDDYDIPGARAQVGIEQLR
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AHVPDGGGATAQVVVHDPSGAALDPADLTGLVQRLHRLDHASYVTEPRVSADGDTALVTV
HHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
SYDAPVTDSDLVGANGYDPLVDAIAPLRADGLQAELGGELPGGAESQMSGTGEIAGVIAA
EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHH
LVLLVVAFGSVVAAGLPLVIALMGLAVGSAGVTLLAATMDVSTAAPTVATMVGLGVGIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHCCHHH
ALLLVTRHVEFLGRGLDKRDAAGRAMATAGRSVVFASATVLISLMGLRLGGLPVYATFGY
HHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ATALAVVAVLAAAITLVPALCGLAGRRLLPRRTRTGRSARGAKAPLTARWAARVARRPVV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHH
AALAALMFLLLLAAPTLGMRTWPQDGSSNSPSTSVRRAYDLIAEEYGAGANGPFTIVVDT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
TRADAGDVADRVADHAGIAGVTVPVTSPDGAIALFDAEPTTGPADERTSDLVATLRADLP
CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC
AGVEVTGTTPIFADISAMLSSRLWLVVGFVVAVSVLLLAMMFRSVVVPVKAAVMNLLSIG
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASYGVLTAVFQWGWGGSVLGIDHAVAVSSWIPILNFAILFGLSMDYEVFLLSRIREEWLR
CHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TGDARGSVERGLASTGRVISSAAAIMVVVFLGFSTEADTVVKQLGFGMAVAIVLDATVVR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
MVLVPATMTLLGRWNWWLPAWLDRLLPTIEAERHESDDEIWGDFDQTDQRTPAGV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]