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The map label for this gene is nudB [C]

Identifier: 119717085

GI number: 119717085

Start: 3036201

End: 3036629

Strand: Reverse

Name: nudB [C]

Synonym: Noca_2861

Alternate gene names: 119717085

Gene position: 3036629-3036201 (Counterclockwise)

Preceding gene: 119717088

Following gene: 119717084

Centisome position: 60.9

GC content: 73.43

Gene sequence:

>429_bases
ATGCACCGGTTCGCCAGCGTCCTGCTCGTGGACGGTCGCGGGTGGCTGCTGCTCCAGGAGCGCGACGAGCGCCCGGTGAT
CGACCCGGACCGGTGGGGCCTGGTGGGCGGGCACGTCGACCCGGGGGAGGACTCCGAGGCTGCGGCGTACCGCGAGCTCG
AGGAGGAGACCGGGATCCGCCTGGCGCCCGGCGAGCTGACCCTCTGGCGGGACACCGAGGTCTTCCACGAGGCCTACGGC
ACCGTCGACGAGGTGCAGGTGTGGGTCGGGCGGACCACGCTGACCGACGCCGACATCGTGGTGGGGGAGGGCCGACGGAT
CGTCTTCGTCGAGCCCGGTCGGGCCAGGGCGCTCGACCTGACCGCGTCGGCGCGCCGGGTCGTCCCCGAGTTCCTGGCGT
CCGCGACGTACGACGACATCCTCGGGTGA

Upstream 100 bases:

>100_bases
CGACCGCGACGAGGCGGACCACGAGGAGCATGAGCGTCAGCCTCCCACCCTCGACCGCGTCCCCCAGATAGGCCCGGCCG
GGCATCGATAGCGTGAGCGC

Downstream 100 bases:

>100_bases
TCGCGGGCATCCCGCTGGCGACCGTCGTCGTCGCCGCCGTGCCTGACGCTCGCCGTGGAGCGGGAGGAGATCGACCGGCG
GGGCTCGGCTGGTCGATCCC

Product: NUDIX hydrolase

Products: dAMP; pyrophosphate [C]

Alternate protein names: Nudix Hydrolase

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MHRFASVLLVDGRGWLLLQERDERPVIDPDRWGLVGGHVDPGEDSEAAAYRELEEETGIRLAPGELTLWRDTEVFHEAYG
TVDEVQVWVGRTTLTDADIVVGEGRRIVFVEPGRARALDLTASARRVVPEFLASATYDDILG

Sequences:

>Translated_142_residues
MHRFASVLLVDGRGWLLLQERDERPVIDPDRWGLVGGHVDPGEDSEAAAYRELEEETGIRLAPGELTLWRDTEVFHEAYG
TVDEVQVWVGRTTLTDADIVVGEGRRIVFVEPGRARALDLTASARRVVPEFLASATYDDILG
>Mature_142_residues
MHRFASVLLVDGRGWLLLQERDERPVIDPDRWGLVGGHVDPGEDSEAAAYRELEEETGIRLAPGELTLWRDTEVFHEAYG
TVDEVQVWVGRTTLTDADIVVGEGRRIVFVEPGRARALDLTASARRVVPEFLASATYDDILG

Specific function: Hydrolysis Of Nucleoside Triphosphates With A Preference For Datp. [C]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 15829; Mature: 15829

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRFASVLLVDGRGWLLLQERDERPVIDPDRWGLVGGHVDPGEDSEAAAYRELEEETGIR
CCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCE
LAPGELTLWRDTEVFHEAYGTVDEVQVWVGRTTLTDADIVVGEGRRIVFVEPGRARALDL
ECCCCEEEEECHHHHHHHHCCHHHEEEEECCEECCCCEEEEECCCEEEEECCCCCEEEEC
TASARRVVPEFLASATYDDILG
CHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MHRFASVLLVDGRGWLLLQERDERPVIDPDRWGLVGGHVDPGEDSEAAAYRELEEETGIR
CCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCE
LAPGELTLWRDTEVFHEAYGTVDEVQVWVGRTTLTDADIVVGEGRRIVFVEPGRARALDL
ECCCCEEEEECHHHHHHHHCCHHHEEEEECCEECCCCEEEEECCCEEEEECCCCCEEEEC
TASARRVVPEFLASATYDDILG
CHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxy-ATP; H2O [C]

Specific reaction: deoxy-ATP + H2O = dAMP + pyrophosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA