| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717076
Identifier: 119717076
GI number: 119717076
Start: 3021946
End: 3022881
Strand: Reverse
Name: 119717076
Synonym: Noca_2852
Alternate gene names: NA
Gene position: 3022881-3021946 (Counterclockwise)
Preceding gene: 119717079
Following gene: 119717075
Centisome position: 60.63
GC content: 73.5
Gene sequence:
>936_bases ATGCCTGAGCGCCTGGTGCACATCGTCGACGAGGTCCCCGAGCTCGACGACGCCCGCTCCCGGGGCGCGCTGACGATGGT GCTCGTCCTGGACGGCTTCCTCGACGCCGGCAACGCCGCCGGACGGGCCGCGCAGCACCTGGTGGACCTCTCCGAGGGCC CGGTCGTGGCCACCTTCGACGTGGACGAGTTCCACGACTACCGTGCCCGGCGGCCACCGATGTCGTTCGTCCGGGACCAC TACGACGCGTACGACGCCCCGCGGCTGGTCGTCCGGCTGCTCGCCGACACCGGCGGCACGCCGTACCTCCTGCTGCACGG TCCCGAGCCCGACAACCGCTGGGAGGCGTTCTGCCGGGCGGTGCGCGAGGTCGTCGAGCGGTTCGGTGTGAGCCGCGTCG TCGGGATGGGCTCGGTGCCGATGGCGGTGCCGCACACCCGCCCGATCGCGATCACCCACCACGCCAACAGCCCCGAGCTG ATCACCGGCGAGAGCCCGTGGCGCGGCGAGCTGCGGATCCCGAGCAGCGCGCAGGCCCTGCTCGAGGTCCGGCTGGGGGA GTGGGGCCACGACGCGATGGGCTTCGTCGCGCACATCCCGCACTACCTCGCCCAGATGGACTACCCCCGGGCCTCGGCGG CGCTGCTCGAGCAGGTCGAGATCGCCGGCCGGCTGACCGTGGACCTCTCCGGGCTGCGTGCTGAGGCCGAGGACCGCGAG GCCGAGATCGCGCGGTACCTGGCCGCCAACGAGGAGGTGGCCGAGGTGGTCGCCGCGCTGGAACGGCAGTACGACGCGTT CGAGCGCGCCGAGGAGAGCGGCACCAGCCTGCTCGCGCGGGACCAGCGGCTGCCCACGGGCGAGGAGATCGGCAAGGAGT TCGAGCGGTTCCTCGCCGGCCTCGACCGCCCGGGCGACGACGAGCCCCAGGGCTGA
Upstream 100 bases:
>100_bases GGGGGTCTCCTTGGGTCGGGGATGCCCGTAGGTTACCCCGCAGTAACAAAGTGGTCACCCGCTGGCGATGTGACGTCTCC CTCGCCACTAGGCTGGTGCC
Downstream 100 bases:
>100_bases CTGGGTGCCGAGGAACGCCGACGAGCTCGTCGCGCTGCTCGACCTCGAGCGCATCGACGACAACCTCTTCCGGGGGCAGC AGATGCCCTCGTCGCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MPERLVHIVDEVPELDDARSRGALTMVLVLDGFLDAGNAAGRAAQHLVDLSEGPVVATFDVDEFHDYRARRPPMSFVRDH YDAYDAPRLVVRLLADTGGTPYLLLHGPEPDNRWEAFCRAVREVVERFGVSRVVGMGSVPMAVPHTRPIAITHHANSPEL ITGESPWRGELRIPSSAQALLEVRLGEWGHDAMGFVAHIPHYLAQMDYPRASAALLEQVEIAGRLTVDLSGLRAEAEDRE AEIARYLAANEEVAEVVAALERQYDAFERAEESGTSLLARDQRLPTGEEIGKEFERFLAGLDRPGDDEPQG
Sequences:
>Translated_311_residues MPERLVHIVDEVPELDDARSRGALTMVLVLDGFLDAGNAAGRAAQHLVDLSEGPVVATFDVDEFHDYRARRPPMSFVRDH YDAYDAPRLVVRLLADTGGTPYLLLHGPEPDNRWEAFCRAVREVVERFGVSRVVGMGSVPMAVPHTRPIAITHHANSPEL ITGESPWRGELRIPSSAQALLEVRLGEWGHDAMGFVAHIPHYLAQMDYPRASAALLEQVEIAGRLTVDLSGLRAEAEDRE AEIARYLAANEEVAEVVAALERQYDAFERAEESGTSLLARDQRLPTGEEIGKEFERFLAGLDRPGDDEPQG >Mature_310_residues PERLVHIVDEVPELDDARSRGALTMVLVLDGFLDAGNAAGRAAQHLVDLSEGPVVATFDVDEFHDYRARRPPMSFVRDHY DAYDAPRLVVRLLADTGGTPYLLLHGPEPDNRWEAFCRAVREVVERFGVSRVVGMGSVPMAVPHTRPIAITHHANSPELI TGESPWRGELRIPSSAQALLEVRLGEWGHDAMGFVAHIPHYLAQMDYPRASAALLEQVEIAGRLTVDLSGLRAEAEDREA EIARYLAANEEVAEVVAALERQYDAFERAEESGTSLLARDQRLPTGEEIGKEFERFLAGLDRPGDDEPQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34373; Mature: 34242
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERLVHIVDEVPELDDARSRGALTMVLVLDGFLDAGNAAGRAAQHLVDLSEGPVVATFD CCHHHHHHHHHCCCCCCHHCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEE VDEFHDYRARRPPMSFVRDHYDAYDAPRLVVRLLADTGGTPYLLLHGPEPDNRWEAFCRA HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH VREVVERFGVSRVVGMGSVPMAVPHTRPIAITHHANSPELITGESPWRGELRIPSSAQAL HHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEECCHHHHHH LEVRLGEWGHDAMGFVAHIPHYLAQMDYPRASAALLEQVEIAGRLTVDLSGLRAEAEDRE HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCHHHH AEIARYLAANEEVAEVVAALERQYDAFERAEESGTSLLARDQRLPTGEEIGKEFERFLAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH LDRPGDDEPQG CCCCCCCCCCC >Mature Secondary Structure PERLVHIVDEVPELDDARSRGALTMVLVLDGFLDAGNAAGRAAQHLVDLSEGPVVATFD CHHHHHHHHHCCCCCCHHCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEE VDEFHDYRARRPPMSFVRDHYDAYDAPRLVVRLLADTGGTPYLLLHGPEPDNRWEAFCRA HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH VREVVERFGVSRVVGMGSVPMAVPHTRPIAITHHANSPELITGESPWRGELRIPSSAQAL HHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEECCHHHHHH LEVRLGEWGHDAMGFVAHIPHYLAQMDYPRASAALLEQVEIAGRLTVDLSGLRAEAEDRE HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCHHHH AEIARYLAANEEVAEVVAALERQYDAFERAEESGTSLLARDQRLPTGEEIGKEFERFLAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH LDRPGDDEPQG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA