Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717013

Identifier: 119717013

GI number: 119717013

Start: 2957372

End: 2957905

Strand: Reverse

Name: 119717013

Synonym: Noca_2789

Alternate gene names: NA

Gene position: 2957905-2957372 (Counterclockwise)

Preceding gene: 119717014

Following gene: 119717012

Centisome position: 59.33

GC content: 70.41

Gene sequence:

>534_bases
GTGAGCGCGGCCGCGCAGGACGAGGGCCGCCACGCGCGGATCCTGGCCGAGGCCGAGCGGATCATGGCGCTCGGCGAGTG
CTCGGAGTCCCAGGCGCCGTACGAGGTGAACCAGCCGACGATCGGCACCTGGCTCGACGCGATGGGCTACGACAACGAGC
GCTTCCGCTCCGGCGAGGCGCCGCCGTCGATGGCGCAGGTCTGGACGATGCGCGGCCTCGGTCGCCGCCGTCCCGACGAC
GACCCGCTGAGTGCGATGATGGCCCTCCTCACGGACGAGGGCTACACCGCCGTGCTCGGCACCAACTGCGAGCAGAGCTA
CGACCGCTACCTCAAGGTCGGCGAGCACGTCCGCGTCACCACCGCGCTCGACTCCGTGGTCGGGCCGAAGCTCACCGCGA
TGGGCGAGGGCTACTTCGTCACGTCCCGCAACACCTGGTACGTCGCCGGTCCCGACGGGCACAGCGAGCGCGTCGCGACC
ATGCTGTTCCGGGTGCTCAAGTTCATTCCCAAGGGCTCTGGAGGTGGCGCATGA

Upstream 100 bases:

>100_bases
GCGATGTTCGGGCTCGGGCTGCCGCGGGTGCCGCGATGAATCACCCCACGAAGTTCTTCTCCTCCGCTTCGCTCCCCCGA
ACAACTTCGCGGGGACCCCG

Downstream 100 bases:

>100_bases
CTGCAGGAATCGTGCGCCCGATGATCGGGCGCGACTCCAGATTCTTCTGGGACGGCACCGCGCTCGGCGAGCTGCGCATC
CAGAAGTGCAACGCGTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEAPPSMAQVWTMRGLGRRRPDD
DPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVTTALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVAT
MLFRVLKFIPKGSGGGA

Sequences:

>Translated_177_residues
MSAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEAPPSMAQVWTMRGLGRRRPDD
DPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVTTALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVAT
MLFRVLKFIPKGSGGGA
>Mature_176_residues
SAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEAPPSMAQVWTMRGLGRRRPDDD
PLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVTTALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVATM
LFRVLKFIPKGSGGGA

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19325; Mature: 19194

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHCCCCHHHCCCCC
PPSMAQVWTMRGLGRRRPDDDPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVT
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEH
TALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVATMLFRVLKFIPKGSGGGA
HHHHHHHCCCEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEA
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHCCCCHHHCCCCC
PPSMAQVWTMRGLGRRRPDDDPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVT
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEH
TALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVATMLFRVLKFIPKGSGGGA
HHHHHHHCCCEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA