| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ascG [C]
Identifier: 119716953
GI number: 119716953
Start: 2902126
End: 2902317
Strand: Reverse
Name: ascG [C]
Synonym: Noca_2728
Alternate gene names: 119716953
Gene position: 2902317-2902126 (Counterclockwise)
Preceding gene: 119716954
Following gene: 119716950
Centisome position: 58.21
GC content: 70.31
Gene sequence:
>192_bases GTGACCATGCAGCAGGTGGCGGCCGAGGCCGGCGTCTCCGTCTCGACCGTCTCGAAGGTGCTCAACGGCCGCTACGGGGT GTCCAGCGAGACGTCCGCGCACGTCACCGAGGTGGTCCACCGCCTCGGACACGAGGCCAGCTTGGTGGCCCGCAGCCTGC GTAACAGGCGGAGCTGGCCAGCCCTCCGTTGA
Upstream 100 bases:
>100_bases GCCGGACAAGAAGGCGCTGCGGGCGCAGTACTGGACCGGGGACCGCGCGGTCGGCTGACCGCTCGCGGCGTCGTCGCACT GCCGCTCCGTCGGTGGCAGG
Downstream 100 bases:
>100_bases CAACCGTGCGGCAGCCGATCGCGAGGTCCACGCCGAGCTGGCGACGACGCTCGTCCCCCGCGGCTCGACGGCCGCACCGG GCCGCACCTCCTGAGCGGTG
Product: regulatory protein LacI
Products: NA
Alternate protein names: Transcriptional Regulator LacI Family; Regulatory Protein LacI
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MTMQQVAAEAGVSVSTVSKVLNGRYGVSSETSAHVTEVVHRLGHEASLVARSLRNRRSWPALR
Sequences:
>Translated_63_residues MTMQQVAAEAGVSVSTVSKVLNGRYGVSSETSAHVTEVVHRLGHEASLVARSLRNRRSWPALR >Mature_62_residues TMQQVAAEAGVSVSTVSKVLNGRYGVSSETSAHVTEVVHRLGHEASLVARSLRNRRSWPALR
Specific function: Repressor Of The Asc Operon. The Cryptic Operon Is Activated By The Insertion Of Is186 Into The Ascg Gene. [C]
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6832; Mature: 6701
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQQVAAEAGVSVSTVSKVLNGRYGVSSETSAHVTEVVHRLGHEASLVARSLRNRRSWP CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC ALR CCC >Mature Secondary Structure TMQQVAAEAGVSVSTVSKVLNGRYGVSSETSAHVTEVVHRLGHEASLVARSLRNRRSWP CHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC ALR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA