| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716732
Identifier: 119716732
GI number: 119716732
Start: 2673689
End: 2674408
Strand: Direct
Name: 119716732
Synonym: Noca_2506
Alternate gene names: NA
Gene position: 2673689-2674408 (Clockwise)
Preceding gene: 119716731
Following gene: 119716733
Centisome position: 53.63
GC content: 74.44
Gene sequence:
>720_bases GTGACCGACCTGCTGCTGGTCGCCGGCGTCGCGGCGGTGGTGTTCGTGGTGGCAGCGATGGCACAGGCGATCACCGGATT CGGCTCGGCGCTGGTCGCCGTACCGCTGCTGGCGCTGGTGGTGCACCCGATCGCCGCGGTGGTCGCCGCCACCGCGATGA GCCTGGTGCTCACGAGTGGCGCGGCCTGGCGGGAACGGTCGCACCTGGACGGTCCCGCGGCGCGGACCCTGACGGTGACC GGCATCGTGGGGATGCCGGTCGGGCTGGTGCTCCTCGGCCTCGCCGACGAGTCGCGGCTGCAGGCGTGGATCGCGGGCGC CATGTTGGTCATGGTGCTGCTGGTGGCGAGTGGCGCCCGGATCGGCGCTCGCGGCCTACCGGTCGCCGGCCTGGTCAGCG GCGCGCTGCTGACCTCGACCGGCATGAACGGGCCGCCGCTGGTGATGGCGCTGCTGGACCGGGAGCCGCGGCGCTACCGG GCCACCCTCCAGGGGGTGTTCGCGGCCCAGGACGTGGTGGCGGTCGTCGCCTTCCTCGTGCTCGGGTACGTCGACGGCGA GGTCGCGCTGCTGACCGCGTCCGGCGTCGTGGGGCTGCCGGTCGGCTGGCGGCTCGGCGACGCGGTCTTCCACAAGATCC CGGCCGCCCGGCTGCGTCCGCTGGTCATCGGCGGCCTGCTGGTCACGGCCGCCTCGATGCTGGTCGGCGCGGTCACCTGA
Upstream 100 bases:
>100_bases ACGCCGGCACCCCCGCCGCCGCCGCCGTCGTGGATGAACAAGACCGACGGCAGCTGACCTGTCCGAGGTCACCCCTGCGT CGCGGCCGTAGCATCCGTCT
Downstream 100 bases:
>100_bases CCGTCGGACCGGACCCCGACGACGGGCCCGGGGAAGAAGCCGCCAGGGAGCAGGACGAGGCCCTGAGCATCCTTCGGTGC CGGTCTCGACCGGGGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTDLLLVAGVAAVVFVVAAMAQAITGFGSALVAVPLLALVVHPIAAVVAATAMSLVLTSGAAWRERSHLDGPAARTLTVT GIVGMPVGLVLLGLADESRLQAWIAGAMLVMVLLVASGARIGARGLPVAGLVSGALLTSTGMNGPPLVMALLDREPRRYR ATLQGVFAAQDVVAVVAFLVLGYVDGEVALLTASGVVGLPVGWRLGDAVFHKIPAARLRPLVIGGLLVTAASMLVGAVT
Sequences:
>Translated_239_residues MTDLLLVAGVAAVVFVVAAMAQAITGFGSALVAVPLLALVVHPIAAVVAATAMSLVLTSGAAWRERSHLDGPAARTLTVT GIVGMPVGLVLLGLADESRLQAWIAGAMLVMVLLVASGARIGARGLPVAGLVSGALLTSTGMNGPPLVMALLDREPRRYR ATLQGVFAAQDVVAVVAFLVLGYVDGEVALLTASGVVGLPVGWRLGDAVFHKIPAARLRPLVIGGLLVTAASMLVGAVT >Mature_238_residues TDLLLVAGVAAVVFVVAAMAQAITGFGSALVAVPLLALVVHPIAAVVAATAMSLVLTSGAAWRERSHLDGPAARTLTVTG IVGMPVGLVLLGLADESRLQAWIAGAMLVMVLLVASGARIGARGLPVAGLVSGALLTSTGMNGPPLVMALLDREPRRYRA TLQGVFAAQDVVAVVAFLVLGYVDGEVALLTASGVVGLPVGWRLGDAVFHKIPAARLRPLVIGGLLVTAASMLVGAVT
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24076; Mature: 23945
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLLLVAGVAAVVFVVAAMAQAITGFGSALVAVPLLALVVHPIAAVVAATAMSLVLTSG CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAWRERSHLDGPAARTLTVTGIVGMPVGLVLLGLADESRLQAWIAGAMLVMVLLVASGAR CHHHHHCCCCCCCHHEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC IGARGLPVAGLVSGALLTSTGMNGPPLVMALLDREPRRYRATLQGVFAAQDVVAVVAFLV CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGYVDGEVALLTASGVVGLPVGWRLGDAVFHKIPAARLRPLVIGGLLVTAASMLVGAVT HHHCCCCEEEEEECCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDLLLVAGVAAVVFVVAAMAQAITGFGSALVAVPLLALVVHPIAAVVAATAMSLVLTSG CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAWRERSHLDGPAARTLTVTGIVGMPVGLVLLGLADESRLQAWIAGAMLVMVLLVASGAR CHHHHHCCCCCCCHHEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC IGARGLPVAGLVSGALLTSTGMNGPPLVMALLDREPRRYRATLQGVFAAQDVVAVVAFLV CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGYVDGEVALLTASGVVGLPVGWRLGDAVFHKIPAARLRPLVIGGLLVTAASMLVGAVT HHHCCCCEEEEEECCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA