| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is engA [H]
Identifier: 119716729
GI number: 119716729
Start: 2670404
End: 2671789
Strand: Direct
Name: engA [H]
Synonym: Noca_2503
Alternate gene names: 119716729
Gene position: 2670404-2671789 (Clockwise)
Preceding gene: 119716728
Following gene: 119716731
Centisome position: 53.56
GC content: 72.44
Gene sequence:
>1386_bases ATGACCGAGCTCGAGGGTGCCCCCGAGGGCGCCCCGGAGACCGCTGCGGAGACCGTCCCCGAGGCCGCCGGACCCGTCCC CGTCCTCGCGGTCGTCGGCCGACCCAACGTCGGGAAGTCGACGCTGGTGAACCGGATCATCGGCCGCCGCGAGGCAGTCG TCGAGGACGTCCCCGGTGTGACCCGCGACCGCGTCTCCTACGACGCGAGCTGGAACGGCCGCGCGTTCACCGTCGTCGAC ACCGGCGGCTGGGATCCGGACGCCCGCGGCCTGGCCGAGCGGATCGCCGGGCAGGCGGAGGTCGCGGTCAGCCTGGCCGA CGCCGTGCTGTTCGTGGTCGATGCGACCGTTGGGATCACCGACGCCGACGAGGCCGTCGTGCGGATCCTGCGGAAGTCCG CGAAGCCGGTCGTGCTGGCCGCGAACAAGGTCGACGACCAGCGCACCGAGGCGGAGGCCTACGGGCTGTGGAACCTCGGG CTCGGCGAGCCGTACGCCGTGTCCGCGCTGCACGGTCGTGGCTCGGGCGACCTGCTCGACGCCGTGCTGGCGGCGCTTCC CGAGCCGCCTCCCGAGCGTGAGCCGGAGCCCGGCGGGCCGCGGCGGATCGCGATCGTCGGCAAGCCCAACGTCGGCAAGT CCTCCCTGCTCAACAAGCTCGCCGGCGAGGAGCGGGCCGTGGTCGACAACGTCGCCGGCACCACCGTCGACCCGGTCGAC GAGCTGATCGAGCTCGGCGGCAAGACCTGGCGGTTCATCGACACCGCGGGCATCCGCAAGCGGGTCAAGGAGGCCTCCGG GCACGAGTACTACGCCTCGCTGCGCACCGCGACGGCGATCGACCGGGCCGAGGTCGCGGTCCTGGTCGTCGACGGCGGGG AGTCGATCTCCGAGCAGGACGTCCGGATCATCCAGACCGTCCGCGAGGCCGGCCGCGCGCTCGTCATCGCCTTCAACAAG TGGGACCTCGTCGACGAGGAGCGCCGCTACTACCTCGACCGTGAGATCGAGCGCGACCTCGTCCAGGTGCAGTGGGCCCC GCGGATCAACATCACCGCCCGGACCGGGTGGCACGTCGACCGGCTCGTCCCGGCGCTGGAGAAGGCCCTGGAGGGCTGGG AGACCCGCGTCTCGACCGGCGCGCTCAACGGCTTCCTCGGCCGCCTGGTCGCCGAGCACCCCCACCCGGTGCGCAGCGGC AAGCAGCCGAAGATCCTGTTCGGGACCCAGGCCTCGACCGCGCCGCCGACCTTCATCCTGTTCACGAGCGGCAAGCTGGA CGCCGCCTACGAGCGGTTCATCGAGCGTCGCCTGCGCGAGGAGTTCGGGTTCGTGGGCACGCCGATCGTGCTGCAGCAGC GGCCGCGGGAGAAGCGCAAGCGGTAG
Upstream 100 bases:
>100_bases ACCGCGCGCGCACGTCGACCGGCCGGGAGCTGCCGGGTCCGCTGCCCGTGACCGACGTAGACCCAGACCCCGCCACCGGG GTCACCGACCAAGGAGCACC
Downstream 100 bases:
>100_bases CCCGCGGGTCAGCGTCGGGCCATGCGCAGGCTCGTGGTCCTCGCCCAGGCCGGGGGCGTCGCGGGTCGTGTGCCCCACGA CGCGCCATAGCGCGTGCTGA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTELEGAPEGAPETAAETVPEAAGPVPVLAVVGRPNVGKSTLVNRIIGRREAVVEDVPGVTRDRVSYDASWNGRAFTVVD TGGWDPDARGLAERIAGQAEVAVSLADAVLFVVDATVGITDADEAVVRILRKSAKPVVLAANKVDDQRTEAEAYGLWNLG LGEPYAVSALHGRGSGDLLDAVLAALPEPPPEREPEPGGPRRIAIVGKPNVGKSSLLNKLAGEERAVVDNVAGTTVDPVD ELIELGGKTWRFIDTAGIRKRVKEASGHEYYASLRTATAIDRAEVAVLVVDGGESISEQDVRIIQTVREAGRALVIAFNK WDLVDEERRYYLDREIERDLVQVQWAPRINITARTGWHVDRLVPALEKALEGWETRVSTGALNGFLGRLVAEHPHPVRSG KQPKILFGTQASTAPPTFILFTSGKLDAAYERFIERRLREEFGFVGTPIVLQQRPREKRKR
Sequences:
>Translated_461_residues MTELEGAPEGAPETAAETVPEAAGPVPVLAVVGRPNVGKSTLVNRIIGRREAVVEDVPGVTRDRVSYDASWNGRAFTVVD TGGWDPDARGLAERIAGQAEVAVSLADAVLFVVDATVGITDADEAVVRILRKSAKPVVLAANKVDDQRTEAEAYGLWNLG LGEPYAVSALHGRGSGDLLDAVLAALPEPPPEREPEPGGPRRIAIVGKPNVGKSSLLNKLAGEERAVVDNVAGTTVDPVD ELIELGGKTWRFIDTAGIRKRVKEASGHEYYASLRTATAIDRAEVAVLVVDGGESISEQDVRIIQTVREAGRALVIAFNK WDLVDEERRYYLDREIERDLVQVQWAPRINITARTGWHVDRLVPALEKALEGWETRVSTGALNGFLGRLVAEHPHPVRSG KQPKILFGTQASTAPPTFILFTSGKLDAAYERFIERRLREEFGFVGTPIVLQQRPREKRKR >Mature_460_residues TELEGAPEGAPETAAETVPEAAGPVPVLAVVGRPNVGKSTLVNRIIGRREAVVEDVPGVTRDRVSYDASWNGRAFTVVDT GGWDPDARGLAERIAGQAEVAVSLADAVLFVVDATVGITDADEAVVRILRKSAKPVVLAANKVDDQRTEAEAYGLWNLGL GEPYAVSALHGRGSGDLLDAVLAALPEPPPEREPEPGGPRRIAIVGKPNVGKSSLLNKLAGEERAVVDNVAGTTVDPVDE LIELGGKTWRFIDTAGIRKRVKEASGHEYYASLRTATAIDRAEVAVLVVDGGESISEQDVRIIQTVREAGRALVIAFNKW DLVDEERRYYLDREIERDLVQVQWAPRINITARTGWHVDRLVPALEKALEGWETRVSTGALNGFLGRLVAEHPHPVRSGK QPKILFGTQASTAPPTFILFTSGKLDAAYERFIERRLREEFGFVGTPIVLQQRPREKRKR
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=455, Percent_Identity=36.2637362637363, Blast_Score=271, Evalue=9e-74, Organism=Escherichia coli, GI2367268, Length=190, Percent_Identity=32.1052631578947, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788919, Length=126, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17507259, Length=128, Percent_Identity=36.71875, Blast_Score=69, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=180, Percent_Identity=26.1111111111111, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 50089; Mature: 49958
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELEGAPEGAPETAAETVPEAAGPVPVLAVVGRPNVGKSTLVNRIIGRREAVVEDVPGV CCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC TRDRVSYDASWNGRAFTVVDTGGWDPDARGLAERIAGQAEVAVSLADAVLFVVDATVGIT CHHCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC DADEAVVRILRKSAKPVVLAANKVDDQRTEAEAYGLWNLGLGEPYAVSALHGRGSGDLLD CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCEEEECCCCCCEEEEEECCCCCHHHHH AVLAALPEPPPEREPEPGGPRRIAIVGKPNVGKSSLLNKLAGEERAVVDNVAGTTVDPVD HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHH ELIELGGKTWRFIDTAGIRKRVKEASGHEYYASLRTATAIDRAEVAVLVVDGGESISEQD HHHHCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHH VRIIQTVREAGRALVIAFNKWDLVDEERRYYLDREIERDLVQVQWAPRINITARTGWHVD HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHH RLVPALEKALEGWETRVSTGALNGFLGRLVAEHPHPVRSGKQPKILFGTQASTAPPTFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEE FTSGKLDAAYERFIERRLREEFGFVGTPIVLQQRPREKRKR EECCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCC >Mature Secondary Structure TELEGAPEGAPETAAETVPEAAGPVPVLAVVGRPNVGKSTLVNRIIGRREAVVEDVPGV CCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC TRDRVSYDASWNGRAFTVVDTGGWDPDARGLAERIAGQAEVAVSLADAVLFVVDATVGIT CHHCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC DADEAVVRILRKSAKPVVLAANKVDDQRTEAEAYGLWNLGLGEPYAVSALHGRGSGDLLD CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCEEEECCCCCCEEEEEECCCCCHHHHH AVLAALPEPPPEREPEPGGPRRIAIVGKPNVGKSSLLNKLAGEERAVVDNVAGTTVDPVD HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHH ELIELGGKTWRFIDTAGIRKRVKEASGHEYYASLRTATAIDRAEVAVLVVDGGESISEQD HHHHCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHH VRIIQTVREAGRALVIAFNKWDLVDEERRYYLDREIERDLVQVQWAPRINITARTGWHVD HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHH RLVPALEKALEGWETRVSTGALNGFLGRLVAEHPHPVRSGKQPKILFGTQASTAPPTFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEE FTSGKLDAAYERFIERRLREEFGFVGTPIVLQQRPREKRKR EECCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA