Click here to switch to the map view.

The map label for this gene is cmk [H]

Identifier: 119716727

GI number: 119716727

Start: 2668890

End: 2669621

Strand: Direct

Name: cmk [H]

Synonym: Noca_2501

Alternate gene names: 119716727

Gene position: 2668890-2669621 (Clockwise)

Preceding gene: 119716726

Following gene: 119716728

Centisome position: 53.53

GC content: 74.04

Gene sequence:

>732_bases
ATGGGTGACTCACCGGTAGGCTGCAGCCCCGTGAACCACACCCCGCGCCCGCCCGCTCCCGGTCTCGTGATCGCCATCGA
CGGCACGTCCGGGTCGGGCAAGTCCAGCACCTCGCGCGGTGTCGCCAGACGGCTCGGGCTGAGCTATCTCGACACCGGCG
CGATGTTCCGCGCGATGACCTGGTGGCTGCTGCGCGAGGGCGTGGACGTCCACGACCCCGCCGCGGTCGCCGCTCGGTGC
GGTGCACCCACCATCGTGTCCGGCACCGACCCCGAGGACCCGACGATCACCGTCGACGGGACCGACGTGGCCGTGGCGAT
CCGCGGCGACGCCGTCAATGCCGCCGTCTCCGCGGTCAGTGCCGTCCCCGAGGTGCGCCGTCAGCTGCTCGACCTGCAGC
GCGCGGTGATCGCCCTGCACACCCGCACCGGCGGCATCGTGGTCGAGGGTCGCGACATCGGCTCGGTGGTCGTCCCCAGC
GCGCCGGTCAAGGTCTACCTCAGCGCGGACCCCGAGGCGCGGGCCGTCCGCCGTGCCGCCGAGCAGGGCGGGGCGGACCT
GGCGGCCACCCAGGAGTCCCTGCTCGCGCGCGACCGGATCGACTCGGGCCGGGCCACGGCGCCCCTCGTGATGGCCGACG
GTGCGGTGCACATCGACACCACGCCGTACTCCCTCGACGAGGTCATCGACCTGGTCGTCGAGCTCGCCGAGCAGGCCGCG
GCGCGGGCGTGA

Upstream 100 bases:

>100_bases
TGCACATCGACCACGACCCGGGCCGGCCGGTCGGCCTGGTCGAGCTGGTCGTCGACGAGACCCGGGCCGAGCACCTCCTG
ACGTCTCTCGAGTCCCGTGG

Downstream 100 bases:

>100_bases
GGACGACCCGATGAGGCCTCGATGAAGGACGTCTCCGCCCACCGTGAGCTGCCGCGCAGCGACACCGCCCGGGGCGCGCC
CCGCTACGCCCTGTACTCGC

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MGDSPVGCSPVNHTPRPPAPGLVIAIDGTSGSGKSSTSRGVARRLGLSYLDTGAMFRAMTWWLLREGVDVHDPAAVAARC
GAPTIVSGTDPEDPTITVDGTDVAVAIRGDAVNAAVSAVSAVPEVRRQLLDLQRAVIALHTRTGGIVVEGRDIGSVVVPS
APVKVYLSADPEARAVRRAAEQGGADLAATQESLLARDRIDSGRATAPLVMADGAVHIDTTPYSLDEVIDLVVELAEQAA
ARA

Sequences:

>Translated_243_residues
MGDSPVGCSPVNHTPRPPAPGLVIAIDGTSGSGKSSTSRGVARRLGLSYLDTGAMFRAMTWWLLREGVDVHDPAAVAARC
GAPTIVSGTDPEDPTITVDGTDVAVAIRGDAVNAAVSAVSAVPEVRRQLLDLQRAVIALHTRTGGIVVEGRDIGSVVVPS
APVKVYLSADPEARAVRRAAEQGGADLAATQESLLARDRIDSGRATAPLVMADGAVHIDTTPYSLDEVIDLVVELAEQAA
ARA
>Mature_242_residues
GDSPVGCSPVNHTPRPPAPGLVIAIDGTSGSGKSSTSRGVARRLGLSYLDTGAMFRAMTWWLLREGVDVHDPAAVAARCG
APTIVSGTDPEDPTITVDGTDVAVAIRGDAVNAAVSAVSAVPEVRRQLLDLQRAVIALHTRTGGIVVEGRDIGSVVVPSA
PVKVYLSADPEARAVRRAAEQGGADLAATQESLLARDRIDSGRATAPLVMADGAVHIDTTPYSLDEVIDLVVELAEQAAA
RA

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787139, Length=225, Percent_Identity=36.8888888888889, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003136
- InterPro:   IPR011994 [H]

Pfam domain/function: PF02224 Cytidylate_kin [H]

EC number: =2.7.4.14 [H]

Molecular weight: Translated: 25012; Mature: 24881

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDSPVGCSPVNHTPRPPAPGLVIAIDGTSGSGKSSTSRGVARRLGLSYLDTGAMFRAMT
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
WWLLREGVDVHDPAAVAARCGAPTIVSGTDPEDPTITVDGTDVAVAIRGDAVNAAVSAVS
HHHHHCCCCCCCCHHHHHHCCCCEEECCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHH
AVPEVRRQLLDLQRAVIALHTRTGGIVVEGRDIGSVVVPSAPVKVYLSADPEARAVRRAA
HHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCEEEECCCCEEEEEECCCHHHHHHHHH
EQGGADLAATQESLLARDRIDSGRATAPLVMADGAVHIDTTPYSLDEVIDLVVELAEQAA
HHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHH
ARA
CCC
>Mature Secondary Structure 
GDSPVGCSPVNHTPRPPAPGLVIAIDGTSGSGKSSTSRGVARRLGLSYLDTGAMFRAMT
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
WWLLREGVDVHDPAAVAARCGAPTIVSGTDPEDPTITVDGTDVAVAIRGDAVNAAVSAVS
HHHHHCCCCCCCCHHHHHHCCCCEEECCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHH
AVPEVRRQLLDLQRAVIALHTRTGGIVVEGRDIGSVVVPSAPVKVYLSADPEARAVRRAA
HHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCEEEECCCCEEEEEECCCHHHHHHHHH
EQGGADLAATQESLLARDRIDSGRATAPLVMADGAVHIDTTPYSLDEVIDLVVELAEQAA
HHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHH
ARA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]