| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716713
Identifier: 119716713
GI number: 119716713
Start: 2654859
End: 2656169
Strand: Direct
Name: 119716713
Synonym: Noca_2487
Alternate gene names: NA
Gene position: 2654859-2656169 (Clockwise)
Preceding gene: 119716712
Following gene: 119716714
Centisome position: 53.25
GC content: 73.23
Gene sequence:
>1311_bases ATGCGTCCCGAGACCCCGGCCGAGACCCTGGCGACCGACAGCGGCACCGTGGTGCCCCAGCACCTGGTCGACCAGATCGT CGCCGGCCGGTGCGTGGCGTTCGTGGGCGCCGGGTTCGCCGCCCCCGCCGTGCCGGCATGGCAGGTGCTGCTGCGTGGTC TGGCGGATCGGGCGGGACTGGACGAGGAGACCTCGGCCTGGGTCGCCCAGCTCGTGGAGCACGGGGGATCGCGCGACCTC GAGGCGGCGGCGCAGGTGCTGCACACCGCGATGGGGGAGGCGTTCGACCCGGCGCTCGCGGGCATCCTTGCCACGGAGGG GCGCCCCGACGCGATCGCCGCGCGCCGCCGGCTGCTGGCCGGCATCCCCTTCGACGCGATCCTGACCACCAACTTCGATC CGTTCCTGGTCGGCAGCGTGCCCGGGCCGGACGCCTACCAGCAGATCCTGCGCGACCCACCGCACCGGTGGTGGGAGCCG CGGTACTGGACGGCGGAGTCACCCGGCGCGCCGGTCGTGAAGCTGCACGGCGAGGTCGGGCCCCTGGGCGACACGGTCGT CTTCACCCAACGTGACTACCGGGACCGGCTCTACAGCAGCCCGGCGTACATGACCTTCCTGCGGTCACTGTTCGCGACCA GCACGGTCCTCTTCCTGGGCGTGTCGTTCACCGACGCCTACCTCAACGAGCTGCGCTCCGAGGTGCTGGCGATGATCGAT CAGCGCGAGGACGACCCACCGGTCGCGTACGCCGTGCTGCCGGACGTGGCACCGCACCAGGCGCGCTACCTGCACCAGCA CGAGGGGCTCGGGACGATCACCTTCGACACCGCCGGGGGCAGCGACTGGTCAGGCTTCGACCGGGTGCTCGAGGCCATCC ACGCCGCCACGAACCCGCGGGCGCAGCTCGGTGCCGTCCTGGCCGCACGGACCGTGCTGTGGGTCGATTCAAGCGCCGAC GACGTCGCCTTCGGTCGCACCGTCCTGGCCGAGGCGGCCGGTGGGGGCGACGCGGGCACCCGCATGGTGCAGGTGGGCTC CGCGGCCGAGGCGGTCGCGTGGCTGCGGCAGGACCGAGCCGACCTGGTGATCGCCGACCTGGCCGCGGGCAGCGACGGCG CACCGGTGGCCGAGAAGCTGTTGACGACGATGCGCCGCGAGGACCTGCGCGCACCGGTCGTCGTGCTCTCCCAGGAGCCC GTCGCCGCGGGCGAGCGGCTACGGATCCTCTCGCTCGGTGCCAGCGAGGTCGCGCACGGCTGGGCCGACCTCTTCCGGGA GCTCACCCGGATCTACGCTCGCCGGGAGTAG
Upstream 100 bases:
>100_bases CACCTGGCCCTGGCCGTGCTCCTGACCGGGGCGCGCCGCCACTAGCGTCGCTAGCGGGTCGTACGGACGCGCAGCCCCGC GAACGCCTACGGTTCCACCT
Downstream 100 bases:
>100_bases GCTCGCGCAGCCACAACGGCGTGGCGCTGAGAACTGAAGGAGCGATGCGGTGAAGGTGGGCGTCCCCAAGGAAGTCAAGA ACAACGAGTACCGGGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MRPETPAETLATDSGTVVPQHLVDQIVAGRCVAFVGAGFAAPAVPAWQVLLRGLADRAGLDEETSAWVAQLVEHGGSRDL EAAAQVLHTAMGEAFDPALAGILATEGRPDAIAARRRLLAGIPFDAILTTNFDPFLVGSVPGPDAYQQILRDPPHRWWEP RYWTAESPGAPVVKLHGEVGPLGDTVVFTQRDYRDRLYSSPAYMTFLRSLFATSTVLFLGVSFTDAYLNELRSEVLAMID QREDDPPVAYAVLPDVAPHQARYLHQHEGLGTITFDTAGGSDWSGFDRVLEAIHAATNPRAQLGAVLAARTVLWVDSSAD DVAFGRTVLAEAAGGGDAGTRMVQVGSAAEAVAWLRQDRADLVIADLAAGSDGAPVAEKLLTTMRREDLRAPVVVLSQEP VAAGERLRILSLGASEVAHGWADLFRELTRIYARRE
Sequences:
>Translated_436_residues MRPETPAETLATDSGTVVPQHLVDQIVAGRCVAFVGAGFAAPAVPAWQVLLRGLADRAGLDEETSAWVAQLVEHGGSRDL EAAAQVLHTAMGEAFDPALAGILATEGRPDAIAARRRLLAGIPFDAILTTNFDPFLVGSVPGPDAYQQILRDPPHRWWEP RYWTAESPGAPVVKLHGEVGPLGDTVVFTQRDYRDRLYSSPAYMTFLRSLFATSTVLFLGVSFTDAYLNELRSEVLAMID QREDDPPVAYAVLPDVAPHQARYLHQHEGLGTITFDTAGGSDWSGFDRVLEAIHAATNPRAQLGAVLAARTVLWVDSSAD DVAFGRTVLAEAAGGGDAGTRMVQVGSAAEAVAWLRQDRADLVIADLAAGSDGAPVAEKLLTTMRREDLRAPVVVLSQEP VAAGERLRILSLGASEVAHGWADLFRELTRIYARRE >Mature_436_residues MRPETPAETLATDSGTVVPQHLVDQIVAGRCVAFVGAGFAAPAVPAWQVLLRGLADRAGLDEETSAWVAQLVEHGGSRDL EAAAQVLHTAMGEAFDPALAGILATEGRPDAIAARRRLLAGIPFDAILTTNFDPFLVGSVPGPDAYQQILRDPPHRWWEP RYWTAESPGAPVVKLHGEVGPLGDTVVFTQRDYRDRLYSSPAYMTFLRSLFATSTVLFLGVSFTDAYLNELRSEVLAMID QREDDPPVAYAVLPDVAPHQARYLHQHEGLGTITFDTAGGSDWSGFDRVLEAIHAATNPRAQLGAVLAARTVLWVDSSAD DVAFGRTVLAEAAGGGDAGTRMVQVGSAAEAVAWLRQDRADLVIADLAAGSDGAPVAEKLLTTMRREDLRAPVVVLSQEP VAAGERLRILSLGASEVAHGWADLFRELTRIYARRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46841; Mature: 46841
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPETPAETLATDSGTVVPQHLVDQIVAGRCVAFVGAGFAAPAVPAWQVLLRGLADRAGL CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC DEETSAWVAQLVEHGGSRDLEAAAQVLHTAMGEAFDPALAGILATEGRPDAIAARRRLLA CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GIPFDAILTTNFDPFLVGSVPGPDAYQQILRDPPHRWWEPRYWTAESPGAPVVKLHGEVG CCCHHHHEECCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEECCCCC PLGDTVVFTQRDYRDRLYSSPAYMTFLRSLFATSTVLFLGVSFTDAYLNELRSEVLAMID CCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QREDDPPVAYAVLPDVAPHQARYLHQHEGLGTITFDTAGGSDWSGFDRVLEAIHAATNPR CCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCH AQLGAVLAARTVLWVDSSADDVAFGRTVLAEAAGGGDAGTRMVQVGSAAEAVAWLRQDRA HHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCC DLVIADLAAGSDGAPVAEKLLTTMRREDLRAPVVVLSQEPVAAGERLRILSLGASEVAHG CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCHHHHHHH WADLFRELTRIYARRE HHHHHHHHHHHHHCCC >Mature Secondary Structure MRPETPAETLATDSGTVVPQHLVDQIVAGRCVAFVGAGFAAPAVPAWQVLLRGLADRAGL CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC DEETSAWVAQLVEHGGSRDLEAAAQVLHTAMGEAFDPALAGILATEGRPDAIAARRRLLA CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GIPFDAILTTNFDPFLVGSVPGPDAYQQILRDPPHRWWEPRYWTAESPGAPVVKLHGEVG CCCHHHHEECCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEECCCCC PLGDTVVFTQRDYRDRLYSSPAYMTFLRSLFATSTVLFLGVSFTDAYLNELRSEVLAMID CCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QREDDPPVAYAVLPDVAPHQARYLHQHEGLGTITFDTAGGSDWSGFDRVLEAIHAATNPR CCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCH AQLGAVLAARTVLWVDSSADDVAFGRTVLAEAAGGGDAGTRMVQVGSAAEAVAWLRQDRA HHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCC DLVIADLAAGSDGAPVAEKLLTTMRREDLRAPVVVLSQEPVAAGERLRILSLGASEVAHG CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCHHHHHHH WADLFRELTRIYARRE HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA