| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is argR [H]
Identifier: 119716699
GI number: 119716699
Start: 2634166
End: 2634708
Strand: Direct
Name: argR [H]
Synonym: Noca_2473
Alternate gene names: 119716699
Gene position: 2634166-2634708 (Clockwise)
Preceding gene: 119716698
Following gene: 119716700
Centisome position: 52.83
GC content: 73.11
Gene sequence:
>543_bases GTGATGAACACCGTCCTGAGGCCCACCACGAAGAGCGCCCGGCACCAGCGCATCGTCGAGCTCGTCACGCAGCGCGAGGT CCACTCGCAGGCCGAGCTCGCCGACCTGCTGGCCGAGAGCGGCCTGCGGGTCACCCAGGCGACGCTCTCGCGCGACCTGG TCGAGCTCGACGCGATCAAGGTCCGCTCGCCCTCGGGCTCGCTCGTGTACGCCGTGCCGGCGGAGGGCGGGGACCGACGA CCGAGCGCGCCGGGGGAGACCGCGGCGGCGACCCACCGGCTGGCCCGGCTGTGCGGCGAGCTCCTCGTGAGTGCCGACGC CAGCGCCAACCTGGTCGTCCTCCGCACTCCTCCCGGCGCGGCCCAGTTCCTCGCCTCGGCCTTCGACAAGGCCGAGTTCC CCGAGATCCTCGGCACCATCGCCGGCGACGACACCGTGCTGGTGATCGGCCGCGGCGCGAGCAGCGGCGACGCCCTGGCC CGCCGCTTCCTCGCCCTCGCCGACGCCAACCAGCACCTCCAGCAGAGAGAAGATCATTCGTGA
Upstream 100 bases:
>100_bases TCGAGGCGGCCGTCCTCGACGGGCCCCAGAGCGTGGTCTGGGACGAGGCGGAGAACCGCCGCCACGCGCAGAAGGCCGTT CTGTCGTTCCTGTTGGAGGC
Downstream 100 bases:
>100_bases GCAAGGTCCTGACGTCCCTCCCGGTCGGCCAGCGGGTCGGCATCGCGTTCTCGGGAGGCCTGGACACCTCGGTGGCGGTG GCCTGGATGCGCGACAAGGG
Product: arginine repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MMNTVLRPTTKSARHQRIVELVTQREVHSQAELADLLAESGLRVTQATLSRDLVELDAIKVRSPSGSLVYAVPAEGGDRR PSAPGETAAATHRLARLCGELLVSADASANLVVLRTPPGAAQFLASAFDKAEFPEILGTIAGDDTVLVIGRGASSGDALA RRFLALADANQHLQQREDHS
Sequences:
>Translated_180_residues MMNTVLRPTTKSARHQRIVELVTQREVHSQAELADLLAESGLRVTQATLSRDLVELDAIKVRSPSGSLVYAVPAEGGDRR PSAPGETAAATHRLARLCGELLVSADASANLVVLRTPPGAAQFLASAFDKAEFPEILGTIAGDDTVLVIGRGASSGDALA RRFLALADANQHLQQREDHS >Mature_180_residues MMNTVLRPTTKSARHQRIVELVTQREVHSQAELADLLAESGLRVTQATLSRDLVELDAIKVRSPSGSLVYAVPAEGGDRR PSAPGETAAATHRLARLCGELLVSADASANLVVLRTPPGAAQFLASAFDKAEFPEILGTIAGDDTVLVIGRGASSGDALA RRFLALADANQHLQQREDHS
Specific function: Regulates arginine biosynthesis genes [H]
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family [H]
Homologues:
Organism=Escherichia coli, GI1789633, Length=144, Percent_Identity=34.0277777777778, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - ProDom: PD007402 [H]
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]
EC number: NA
Molecular weight: Translated: 19098; Mature: 19098
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNTVLRPTTKSARHQRIVELVTQREVHSQAELADLLAESGLRVTQATLSRDLVELDAIK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEE VRSPSGSLVYAVPAEGGDRRPSAPGETAAATHRLARLCGELLVSADASANLVVLRTPPGA EECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH AQFLASAFDKAEFPEILGTIAGDDTVLVIGRGASSGDALARRFLALADANQHLQQREDHS HHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMNTVLRPTTKSARHQRIVELVTQREVHSQAELADLLAESGLRVTQATLSRDLVELDAIK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEE VRSPSGSLVYAVPAEGGDRRPSAPGETAAATHRLARLCGELLVSADASANLVVLRTPPGA EECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH AQFLASAFDKAEFPEILGTIAGDDTVLVIGRGASSGDALARRFLALADANQHLQQREDHS HHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA