| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716638
Identifier: 119716638
GI number: 119716638
Start: 2571515
End: 2572243
Strand: Direct
Name: 119716638
Synonym: Noca_2411
Alternate gene names: NA
Gene position: 2571515-2572243 (Clockwise)
Preceding gene: 119716637
Following gene: 119716639
Centisome position: 51.58
GC content: 75.72
Gene sequence:
>729_bases GTGAGCGTCGACCCCGGTGCCGTCGTGCTGGGCGCCGCTGCCTGCGGCGCGGCCGGCCTGCTGGTGCCGGCCCTGATCGC GCGGATCCCCGAGCCGGATGCGGATCCCGAGCACGACGTGGTGACCGAGGACCCGGGCGCGCCGTCGTACGCCGAGGTCG CGGCCGCGCCCGGCCTGCGCTCCGTCGCGGCGGTGCTGAGCCTGGTCGCCGGTGGCCTGGTCGGCGCCGGTGTGGGCCTC GACTGGCCGCTGCTGTTCCTGCTGCCGCTGGTGCCCGTCGGGGTCGCGCTCGCGGTCGTGGACCTGCGCACCCGGCTGCT GCCCACCGTGGTGGTGTGGCCGACCCTCGCGGCGACCGCTGTGCTGGCGGTGCTGAGCGGGCTCCTCGACGACGACCAGG ATGCTCTGGTCCGGGCCGGGCTGGGCGGGGTCGTCGTGTTCGCGTTGTTCTTCGCGCTGTGGTGGATCCACCCGGCGGGC ATGGGGTACGGCGACGTCCGGCTCTCGGCCGTGCTCGGGCTCGCGCTGGGCTACCTGGGTTGGGCCGAGCTCGCGATCGG CATCTACGGCGGGTTCCTGGCCTTCTCGGTGCCCGGGCTCCTGCTGGCGCTGCTGCGGCGCGACCGGGCGATCCTGAGAG CGGCCTACCCGTTCGGCCCGTTCCTGCTCGCCGGCGCGCTCGCGGGCGTCGTGCTCGGTCCGCTCTGGACCGGTCTCGCC TCGGGGTGA
Upstream 100 bases:
>100_bases TGCACCAGGCGGTCCTGCAGTTCGAGCTCTTCACCGGGGCACCCGGCCCCCTGGACGCCATGCGAGCAGCGGGGGAGCGG GCGCTCGGGACGGCGCCGGC
Downstream 100 bases:
>100_bases CCGGCCCGGTCGGCGTACCCCACGTGAAAGACTGACCCCATGCTGCGTTGGCTGACCGCGGGCGAGTCCCACGGCCCCTC TCTGGTCGCGATCCTCGAGG
Product: peptidase A24A, prepilin type IV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSVDPGAVVLGAAACGAAGLLVPALIARIPEPDADPEHDVVTEDPGAPSYAEVAAAPGLRSVAAVLSLVAGGLVGAGVGL DWPLLFLLPLVPVGVALAVVDLRTRLLPTVVVWPTLAATAVLAVLSGLLDDDQDALVRAGLGGVVVFALFFALWWIHPAG MGYGDVRLSAVLGLALGYLGWAELAIGIYGGFLAFSVPGLLLALLRRDRAILRAAYPFGPFLLAGALAGVVLGPLWTGLA SG
Sequences:
>Translated_242_residues MSVDPGAVVLGAAACGAAGLLVPALIARIPEPDADPEHDVVTEDPGAPSYAEVAAAPGLRSVAAVLSLVAGGLVGAGVGL DWPLLFLLPLVPVGVALAVVDLRTRLLPTVVVWPTLAATAVLAVLSGLLDDDQDALVRAGLGGVVVFALFFALWWIHPAG MGYGDVRLSAVLGLALGYLGWAELAIGIYGGFLAFSVPGLLLALLRRDRAILRAAYPFGPFLLAGALAGVVLGPLWTGLA SG >Mature_241_residues SVDPGAVVLGAAACGAAGLLVPALIARIPEPDADPEHDVVTEDPGAPSYAEVAAAPGLRSVAAVLSLVAGGLVGAGVGLD WPLLFLLPLVPVGVALAVVDLRTRLLPTVVVWPTLAATAVLAVLSGLLDDDQDALVRAGLGGVVVFALFFALWWIHPAGM GYGDVRLSAVLGLALGYLGWAELAIGIYGGFLAFSVPGLLLALLRRDRAILRAAYPFGPFLLAGALAGVVLGPLWTGLAS G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.23.43; 2.1.1.-
Molecular weight: Translated: 24420; Mature: 24289
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDPGAVVLGAAACGAAGLLVPALIARIPEPDADPEHDVVTEDPGAPSYAEVAAAPGLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHH SVAAVLSLVAGGLVGAGVGLDWPLLFLLPLVPVGVALAVVDLRTRLLPTVVVWPTLAATA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAVLSGLLDDDQDALVRAGLGGVVVFALFFALWWIHPAGMGYGDVRLSAVLGLALGYLG HHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH WAELAIGIYGGFLAFSVPGLLLALLRRDRAILRAAYPFGPFLLAGALAGVVLGPLWTGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC SG CC >Mature Secondary Structure SVDPGAVVLGAAACGAAGLLVPALIARIPEPDADPEHDVVTEDPGAPSYAEVAAAPGLR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHH SVAAVLSLVAGGLVGAGVGLDWPLLFLLPLVPVGVALAVVDLRTRLLPTVVVWPTLAATA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAVLSGLLDDDQDALVRAGLGGVVVFALFFALWWIHPAGMGYGDVRLSAVLGLALGYLG HHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH WAELAIGIYGGFLAFSVPGLLLALLRRDRAILRAAYPFGPFLLAGALAGVVLGPLWTGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC SG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA