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The map label for this gene is ycbL [C]

Identifier: 119716623

GI number: 119716623

Start: 2553675

End: 2554388

Strand: Direct

Name: ycbL [C]

Synonym: Noca_2396

Alternate gene names: 119716623

Gene position: 2553675-2554388 (Clockwise)

Preceding gene: 119716622

Following gene: 119716624

Centisome position: 51.22

GC content: 71.29

Gene sequence:

>714_bases
GTGCTGATCGCCGGATTCCCCGCAGGCCCGTGGGGCACGAACTGCTACGTGGCGGCCACCGGCCCCGGTAGCGAGTGCGT
GATCGTCGACCCCGGCAAGGACGCCACCGACGGCATCGCCGAGGTCGTGCGCGAGCACCGGCTCAAGCCGGTCGCGGTGC
TGGTCACCCACGGCCACGTCGACCACATGTGGTGCGTCGCCCCGGTCGCGGGGACGTACGACGCGACCGCGTGGATCCAC
CCCGAGGACCGGCACCTGCTCGGGGACCCGATGGCGGGCATGTCCCCGGACACCGCTCAGCTGGTGCTGGGCAGCGGCTA
CGAGTTCGCCGAGCCCGACGACGTGCAGGAGCTCGCCGACCTCCAGGAGCTCGAGCTCGCGGGGCTGAGGTTCGTGGTCG
ACCACACGCCCGGCCACACCCGGGGCTCGGTCACCTTCCGCTCGCCTTTCCCGGGGGGCACCCGGGGGGCGGAGCCCTCC
GGGAGTGACGTGTCGGAGGTGATGTTCTCCGGCGATCTGCTGTTCGCGGGCTCCATCGGGCGGACCGACCTGCCGGGGGG
CGACCACCAGACGATGCTGCAGAGCCTCAAGAGCAAGGTGCTCCCGCTCGCCGACGACGTCGTCGTCCTGCCGGGCCACG
GCGAGCAGACGTCCATCGGTCGCGAGCGTGCGACCAACCCCTACCTGATTCCGTTGAGTCTCCAGGATCTGTGA

Upstream 100 bases:

>100_bases
CAGCAACTGCGGGAGCCCGCTGGCCTGAGGGCGCCTGCACGGGGGTGGCCGGCGGAGCACCGATGCGACGCCGGCCAGGC
GCGCTCGATAGTCTGCCCGG

Downstream 100 bases:

>100_bases
CATGGCCAAACCCACCCCGCTGAGCGGGTTCCCCGAGCTGCTGCCCGAGCAGCGGGTCGTCGAGCAGCAGGTCGTCGACA
CCCTCCGGCACACGTTCGAG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLIAGFPAGPWGTNCYVAATGPGSECVIVDPGKDATDGIAEVVREHRLKPVAVLVTHGHVDHMWCVAPVAGTYDATAWIH
PEDRHLLGDPMAGMSPDTAQLVLGSGYEFAEPDDVQELADLQELELAGLRFVVDHTPGHTRGSVTFRSPFPGGTRGAEPS
GSDVSEVMFSGDLLFAGSIGRTDLPGGDHQTMLQSLKSKVLPLADDVVVLPGHGEQTSIGRERATNPYLIPLSLQDL

Sequences:

>Translated_237_residues
MLIAGFPAGPWGTNCYVAATGPGSECVIVDPGKDATDGIAEVVREHRLKPVAVLVTHGHVDHMWCVAPVAGTYDATAWIH
PEDRHLLGDPMAGMSPDTAQLVLGSGYEFAEPDDVQELADLQELELAGLRFVVDHTPGHTRGSVTFRSPFPGGTRGAEPS
GSDVSEVMFSGDLLFAGSIGRTDLPGGDHQTMLQSLKSKVLPLADDVVVLPGHGEQTSIGRERATNPYLIPLSLQDL
>Mature_237_residues
MLIAGFPAGPWGTNCYVAATGPGSECVIVDPGKDATDGIAEVVREHRLKPVAVLVTHGHVDHMWCVAPVAGTYDATAWIH
PEDRHLLGDPMAGMSPDTAQLVLGSGYEFAEPDDVQELADLQELELAGLRFVVDHTPGHTRGSVTFRSPFPGGTRGAEPS
GSDVSEVMFSGDLLFAGSIGRTDLPGGDHQTMLQSLKSKVLPLADDVVVLPGHGEQTSIGRERATNPYLIPLSLQDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=225, Percent_Identity=31.5555555555556, Blast_Score=106, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17538952, Length=221, Percent_Identity=26.6968325791855, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 25081; Mature: 25081

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAGFPAGPWGTNCYVAATGPGSECVIVDPGKDATDGIAEVVREHRLKPVAVLVTHGHV
CEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCC
DHMWCVAPVAGTYDATAWIHPEDRHLLGDPMAGMSPDTAQLVLGSGYEFAEPDDVQELAD
CCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
LQELELAGLRFVVDHTPGHTRGSVTFRSPFPGGTRGAEPSGSDVSEVMFSGDLLFAGSIG
HHHHHHCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCC
RTDLPGGDHQTMLQSLKSKVLPLADDVVVLPGHGEQTSIGRERATNPYLIPLSLQDL
CCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MLIAGFPAGPWGTNCYVAATGPGSECVIVDPGKDATDGIAEVVREHRLKPVAVLVTHGHV
CEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCC
DHMWCVAPVAGTYDATAWIHPEDRHLLGDPMAGMSPDTAQLVLGSGYEFAEPDDVQELAD
CCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
LQELELAGLRFVVDHTPGHTRGSVTFRSPFPGGTRGAEPSGSDVSEVMFSGDLLFAGSIG
HHHHHHCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCC
RTDLPGGDHQTMLQSLKSKVLPLADDVVVLPGHGEQTSIGRERATNPYLIPLSLQDL
CCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]