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The map label for this gene is recA

Identifier: 119716568

GI number: 119716568

Start: 2496738

End: 2497790

Strand: Direct

Name: recA

Synonym: Noca_2341

Alternate gene names: 119716568

Gene position: 2496738-2497790 (Clockwise)

Preceding gene: 119716567

Following gene: 119716569

Centisome position: 50.08

GC content: 68.0

Gene sequence:

>1053_bases
ATGGCTGGAGGAGACCGCGAGAAGGCCCTGGACGCCGCACTCGCCAACATCGAGAAGCAGTTCGGCAAGGGTTCGGTCAT
GCGCCTCGGTGACGAGGTCCGGGCCCCGCTCGAGATCATCCCGAGCGGCTCGATCGCCCTCGACGTCGCACTCGGCCTGG
GCGGCTTCCCGCGCGGTCGCGTCGTGGAGATCTACGGCCCGGAGTCCTCGGGCAAGACGACCGTCGCCCTGCACGCGGTG
GCCAACGCCCAGCGCGCCGGCGGCATCGTGGCGTTCATCGACGCCGAGCACGCCCTCGACCCCGACTACGCGAAGAACCT
CGGCGTCGACACCGACGCGTTGCTGGTCTCCCAGCCCGACTCCGGTGAGCAGGCGCTCGAGATCGCGGACATGCTGATCC
GTTCCGGTGCGCTCGACCTGATCGTGATCGACTCGGTCGCCGCGCTGGTGCCCCGGGCCGAGATCGAGGGCGAGATGGGC
GACAGTCACGTCGGCCTCCAGGCCCGCCTGATGAGCCAGGCGCTGCGGAAGATGACCGGTGCGCTCAACAACTCCAAGAC
CACGATGATCTTCATCAACCAGCTGCGCGAGAAGATCGGCGTGATGTTCGGCTCGCCCGAGACCACCACCGGCGGCAAGG
CACTGAAGTTCTACGCCTCGGTCCGCCTCGACGTGCGCCGCATCGAGACGCTCAAGGACGGCACCGACATGGTCGGCAAC
CGGACCCGCGTCAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAGCAGGCCGAGTTCGACATCATGTACGGCAAGGG
CATCAGCCGCGAGGGTGGCCTGATCGACGTCGGCGTCGAGGCGGGCCTGGTTCGCAAGGCCGGTGCCTGGTACACCTACG
AGGGCGACCAGCTCGGCCAGGGCAAGGAGAACGCTCGCGCCTTCCTGCGCGACAACCCCGACCTGGCCAACGAGCTCGAG
AAGAAGATCCTCGAGAAGCTCGGCGTCGGGCCGACCGTCGACCAGGACGTGGCCGAGCTGCCGGCGGAGCCGATCGGTGT
CGGCGACTTCTGA

Upstream 100 bases:

>100_bases
GTCGTCCACAGCTTCGGCGGTGCTGATCAGGGCACTGTCGGTGGCTCGCTCTAGCGTCGCCGATGTGCCTGGACCACGAC
GAGAGAAGAGGAAGCAGCAG

Downstream 100 bases:

>100_bases
GTCCCGACAGCTGCCGCCCTGGCTCGGTGATGTCGCGGCCGGGGTCGACGCGTGGACCCGACGTGCGTCGGCCCCGCCCG
ACCCGGTTGCCGACGGGCCC

Product: recA protein

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MAGGDREKALDAALANIEKQFGKGSVMRLGDEVRAPLEIIPSGSIALDVALGLGGFPRGRVVEIYGPESSGKTTVALHAV
ANAQRAGGIVAFIDAEHALDPDYAKNLGVDTDALLVSQPDSGEQALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMG
DSHVGLQARLMSQALRKMTGALNNSKTTMIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDMVGN
RTRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLVRKAGAWYTYEGDQLGQGKENARAFLRDNPDLANELE
KKILEKLGVGPTVDQDVAELPAEPIGVGDF

Sequences:

>Translated_350_residues
MAGGDREKALDAALANIEKQFGKGSVMRLGDEVRAPLEIIPSGSIALDVALGLGGFPRGRVVEIYGPESSGKTTVALHAV
ANAQRAGGIVAFIDAEHALDPDYAKNLGVDTDALLVSQPDSGEQALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMG
DSHVGLQARLMSQALRKMTGALNNSKTTMIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDMVGN
RTRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLVRKAGAWYTYEGDQLGQGKENARAFLRDNPDLANELE
KKILEKLGVGPTVDQDVAELPAEPIGVGDF
>Mature_349_residues
AGGDREKALDAALANIEKQFGKGSVMRLGDEVRAPLEIIPSGSIALDVALGLGGFPRGRVVEIYGPESSGKTTVALHAVA
NAQRAGGIVAFIDAEHALDPDYAKNLGVDTDALLVSQPDSGEQALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMGD
SHVGLQARLMSQALRKMTGALNNSKTTMIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDMVGNR
TRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLVRKAGAWYTYEGDQLGQGKENARAFLRDNPDLANELEK
KILEKLGVGPTVDQDVAELPAEPIGVGDF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=334, Percent_Identity=64.9700598802395, Blast_Score=453, Evalue=1e-129,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_NOCSJ (A1SJ61)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_923533.1
- ProteinModelPortal:   A1SJ61
- SMR:   A1SJ61
- STRING:   A1SJ61
- GeneID:   4595956
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_2341
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   A1SJ61
- BioCyc:   NSP35761:NOCA_2341-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37255; Mature: 37124

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGDREKALDAALANIEKQFGKGSVMRLGDEVRAPLEIIPSGSIALDVALGLGGFPRGR
CCCCCHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCEEECCCCCEEEEEEECCCCCCCCC
VVEIYGPESSGKTTVALHAVANAQRAGGIVAFIDAEHALDPDYAKNLGVDTDALLVSQPD
EEEEECCCCCCCEEEEEEEHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCC
SGEQALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTG
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ALNNSKTTMIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDMVGN
CCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHCC
RTRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLVRKAGAWYTYEGDQLGQ
CEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHCCCCEEEECCCCCCC
GKENARAFLRDNPDLANELEKKILEKLGVGPTVDQDVAELPAEPIGVGDF
CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AGGDREKALDAALANIEKQFGKGSVMRLGDEVRAPLEIIPSGSIALDVALGLGGFPRGR
CCCCHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCEEECCCCCEEEEEEECCCCCCCCC
VVEIYGPESSGKTTVALHAVANAQRAGGIVAFIDAEHALDPDYAKNLGVDTDALLVSQPD
EEEEECCCCCCCEEEEEEEHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCC
SGEQALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTG
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ALNNSKTTMIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDMVGN
CCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHCC
RTRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLVRKAGAWYTYEGDQLGQ
CEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHCCCCEEEECCCCCCC
GKENARAFLRDNPDLANELEKKILEKLGVGPTVDQDVAELPAEPIGVGDF
CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA