| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716545
Identifier: 119716545
GI number: 119716545
Start: 2469914
End: 2471611
Strand: Direct
Name: 119716545
Synonym: Noca_2318
Alternate gene names: NA
Gene position: 2469914-2471611 (Clockwise)
Preceding gene: 119716544
Following gene: 119716546
Centisome position: 49.54
GC content: 75.32
Gene sequence:
>1698_bases GTGAGCAACCTCAGCACGGATCTGCAAGAACCCGTCCAGTCCGTCGCGGCGGAGCCGGTCGAGATCCGGGTCGACGCCCG GCTGGCCGGGCCGGTCGGCGGGGTCGCGGCCGTCGTCGCCATCGCCTATCTCTCCCGTGCCATCGGTGGCGGCGGGTGGC TCGACTGGGCGCTCGCGCTCGTCACGGGCGCCATCGCGGTGGCACACCTGCAGTCGCTGGCCGACTCCCGGGTGCCGCTG CTGGTCGCCGACGAGCAGGGCGTCCGGCTGCGGCGCGGCCGCACCTGGCGCGGCCTGCCCTGGCAGGACATCGAGCAGCT CGAGCACGAGCCGCGCCGGGGCCTGCTCCGCGACGGCCGGCTGGTCCTGGTGCCCCGTGACACCGACGCCGCGGTGCTGA CCGTCCCGCTGTCGCTCTCGACCCGCGTGGTCGGCGCCGACGACGGCCTGACGGCCGCGCTGGCGCACCTGGCCGACGAG CCCGAGCAGGTCGTCGAGATCGTGACGGAGGACGTCGACCGGGACGACGCGGACGACGTCGTGGACGAAGACCTGGCTGT CGATGCCGAGGACCTGGACGTCGAGGAGTGGGACGAGCCGCACGACGAGCCCGGACCGGTGCACCCGCTCCTGCACGACC CGCGTCCGGCAGTCGCTCGCGGCATCGAGTCCCTGGCGGCCCGGCTGCGGTTGACGCCCCGCCCCGCCGAGGACCCCGTC GAGCCCGAGCCGACGATGCCCGAGCAGGCGGGACCCGAGCCGACGGTGCCGCTGCCGCTCGTGACCAGTCCCACCCAGAG CCCACTACGGGAGCCGGTGCCCGCGGTCCGCTCCGAGATCCGGTTCGACGGTGCCGCCGCGTTCGCGCTGGACCCGGCTG AGGACGCCACCAGGGTCGACGCCCGCCTCCCGGAGGCCGGTGAGCTGCACCGCTCCGAGGGTCTCCTGATCGACGACCTC GTCCTGGAGCAGGGCGCGGTGCTGCCCGCCGCCGACCCCGTCGTCGGCCCCGAGCTCGCCGCGGCCCGGACCCGGCTGTC CCTCACCGTCGACCAGCTCGCGGAGCGCACCCGGATCCGGCCGCACGTCATCGAGTCCATCGAGGTCGACGACTTCGCTC CCTGCGGCGGCGACTTCTACGCCCGCGGCCACCTGCGCACCCTCGCCCGGGTCCTCGGCGTCGACGCGGCACCGCTGCTG GCGGCGTACGACGAGCGCTATGCCGATGCGCCGATCGACGCCCGGCGGGTGCTCCAGGCCGAGCTCGCGACCGGGGTCGA CGGCCCGATCCGCAGCACCCGCGGCGGGCCGAACTGGTCGGTGCTGGTCGCCGCGGTGATGGCGATCGTGCTGGCCTGGT CGATCGCCCGGCTGGCCCTGGACAGCCCGGTCGAGCTCGACCGCAAGCCCGTGCTCAACGGGTCCCCGTCGTCGGTCGGC AAGCTCGGGCCGGCGGTGCCCGTCCTCCTGGAGGCCTCCGCCGGCGGCGCCCACGTCGTCGTCCGGGACGGCGCGGGTGA GGTCGTCTACAGCGGCGACCTGGCCTACGGCCAGTCGAAGACGGTCAAGGCGTCCCCACCGGTGCGGGTCCAGTCCTCCG ACGGTGCGCTCCACGTGACCGTCGACGGGCAGGACCGGGGGCCGCTGGGTGCCGACGGGCAGCCCGCGCAGAACACCTTC GCGGCCGCGACCGAGTGA
Upstream 100 bases:
>100_bases GCCGGGGCGTGGTCGGGCCGAGCGAAGGCTCGAAGGCCCGCGACGTCCTGGTCAAGCCCGACGAGATCGATGCCGTGATC GCGACCCTCCAGGGGGAGAT
Downstream 100 bases:
>100_bases CGCCGCCGCGGCCCGTTTCGACGGGCCGCGGCCCGGTTGACATACTCGACGACGACCATGACGACTGACTCCAGCCCTGC CCCCGTCCGCGAACTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MSNLSTDLQEPVQSVAAEPVEIRVDARLAGPVGGVAAVVAIAYLSRAIGGGGWLDWALALVTGAIAVAHLQSLADSRVPL LVADEQGVRLRRGRTWRGLPWQDIEQLEHEPRRGLLRDGRLVLVPRDTDAAVLTVPLSLSTRVVGADDGLTAALAHLADE PEQVVEIVTEDVDRDDADDVVDEDLAVDAEDLDVEEWDEPHDEPGPVHPLLHDPRPAVARGIESLAARLRLTPRPAEDPV EPEPTMPEQAGPEPTVPLPLVTSPTQSPLREPVPAVRSEIRFDGAAAFALDPAEDATRVDARLPEAGELHRSEGLLIDDL VLEQGAVLPAADPVVGPELAAARTRLSLTVDQLAERTRIRPHVIESIEVDDFAPCGGDFYARGHLRTLARVLGVDAAPLL AAYDERYADAPIDARRVLQAELATGVDGPIRSTRGGPNWSVLVAAVMAIVLAWSIARLALDSPVELDRKPVLNGSPSSVG KLGPAVPVLLEASAGGAHVVVRDGAGEVVYSGDLAYGQSKTVKASPPVRVQSSDGALHVTVDGQDRGPLGADGQPAQNTF AAATE
Sequences:
>Translated_565_residues MSNLSTDLQEPVQSVAAEPVEIRVDARLAGPVGGVAAVVAIAYLSRAIGGGGWLDWALALVTGAIAVAHLQSLADSRVPL LVADEQGVRLRRGRTWRGLPWQDIEQLEHEPRRGLLRDGRLVLVPRDTDAAVLTVPLSLSTRVVGADDGLTAALAHLADE PEQVVEIVTEDVDRDDADDVVDEDLAVDAEDLDVEEWDEPHDEPGPVHPLLHDPRPAVARGIESLAARLRLTPRPAEDPV EPEPTMPEQAGPEPTVPLPLVTSPTQSPLREPVPAVRSEIRFDGAAAFALDPAEDATRVDARLPEAGELHRSEGLLIDDL VLEQGAVLPAADPVVGPELAAARTRLSLTVDQLAERTRIRPHVIESIEVDDFAPCGGDFYARGHLRTLARVLGVDAAPLL AAYDERYADAPIDARRVLQAELATGVDGPIRSTRGGPNWSVLVAAVMAIVLAWSIARLALDSPVELDRKPVLNGSPSSVG KLGPAVPVLLEASAGGAHVVVRDGAGEVVYSGDLAYGQSKTVKASPPVRVQSSDGALHVTVDGQDRGPLGADGQPAQNTF AAATE >Mature_564_residues SNLSTDLQEPVQSVAAEPVEIRVDARLAGPVGGVAAVVAIAYLSRAIGGGGWLDWALALVTGAIAVAHLQSLADSRVPLL VADEQGVRLRRGRTWRGLPWQDIEQLEHEPRRGLLRDGRLVLVPRDTDAAVLTVPLSLSTRVVGADDGLTAALAHLADEP EQVVEIVTEDVDRDDADDVVDEDLAVDAEDLDVEEWDEPHDEPGPVHPLLHDPRPAVARGIESLAARLRLTPRPAEDPVE PEPTMPEQAGPEPTVPLPLVTSPTQSPLREPVPAVRSEIRFDGAAAFALDPAEDATRVDARLPEAGELHRSEGLLIDDLV LEQGAVLPAADPVVGPELAAARTRLSLTVDQLAERTRIRPHVIESIEVDDFAPCGGDFYARGHLRTLARVLGVDAAPLLA AYDERYADAPIDARRVLQAELATGVDGPIRSTRGGPNWSVLVAAVMAIVLAWSIARLALDSPVELDRKPVLNGSPSSVGK LGPAVPVLLEASAGGAHVVVRDGAGEVVYSGDLAYGQSKTVKASPPVRVQSSDGALHVTVDGQDRGPLGADGQPAQNTFA AATE
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59668; Mature: 59536
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLSTDLQEPVQSVAAEPVEIRVDARLAGPVGGVAAVVAIAYLSRAIGGGGWLDWALAL CCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VTGAIAVAHLQSLADSRVPLLVADEQGVRLRRGRTWRGLPWQDIEQLEHEPRRGLLRDGR HHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHCCHHCCHHHCCC LVLVPRDTDAAVLTVPLSLSTRVVGADDGLTAALAHLADEPEQVVEIVTEDVDRDDADDV EEEEECCCCCEEEEEEEECCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH VDEDLAVDAEDLDVEEWDEPHDEPGPVHPLLHDPRPAVARGIESLAARLRLTPRPAEDPV HHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC EPEPTMPEQAGPEPTVPLPLVTSPTQSPLREPVPAVRSEIRFDGAAAFALDPAEDATRVD CCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCHHHHHHHHCCCCCEEEEECCCCHHHHHH ARLPEAGELHRSEGLLIDDLVLEQGAVLPAADPVVGPELAAARTRLSLTVDQLAERTRIR HCCCCCHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEHHHHHHHHCCC PHVIESIEVDDFAPCGGDFYARGHLRTLARVLGVDAAPLLAAYDERYADAPIDARRVLQA CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH ELATGVDGPIRSTRGGPNWSVLVAAVMAIVLAWSIARLALDSPVELDRKPVLNGSPSSVG HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH KLGPAVPVLLEASAGGAHVVVRDGAGEVVYSGDLAYGQSKTVKASPPVRVQSSDGALHVT HCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEECCCCEEEECCCCEEEEE VDGQDRGPLGADGQPAQNTFAAATE ECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNLSTDLQEPVQSVAAEPVEIRVDARLAGPVGGVAAVVAIAYLSRAIGGGGWLDWALAL CCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VTGAIAVAHLQSLADSRVPLLVADEQGVRLRRGRTWRGLPWQDIEQLEHEPRRGLLRDGR HHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHCCHHCCHHHCCC LVLVPRDTDAAVLTVPLSLSTRVVGADDGLTAALAHLADEPEQVVEIVTEDVDRDDADDV EEEEECCCCCEEEEEEEECCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH VDEDLAVDAEDLDVEEWDEPHDEPGPVHPLLHDPRPAVARGIESLAARLRLTPRPAEDPV HHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC EPEPTMPEQAGPEPTVPLPLVTSPTQSPLREPVPAVRSEIRFDGAAAFALDPAEDATRVD CCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCHHHHHHHHCCCCCEEEEECCCCHHHHHH ARLPEAGELHRSEGLLIDDLVLEQGAVLPAADPVVGPELAAARTRLSLTVDQLAERTRIR HCCCCCHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEHHHHHHHHCCC PHVIESIEVDDFAPCGGDFYARGHLRTLARVLGVDAAPLLAAYDERYADAPIDARRVLQA CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH ELATGVDGPIRSTRGGPNWSVLVAAVMAIVLAWSIARLALDSPVELDRKPVLNGSPSSVG HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH KLGPAVPVLLEASAGGAHVVVRDGAGEVVYSGDLAYGQSKTVKASPPVRVQSSDGALHVT HCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEECCCCEEEECCCCEEEEE VDGQDRGPLGADGQPAQNTFAAATE ECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA