Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716503

Identifier: 119716503

GI number: 119716503

Start: 2425729

End: 2426367

Strand: Direct

Name: 119716503

Synonym: Noca_2276

Alternate gene names: NA

Gene position: 2425729-2426367 (Clockwise)

Preceding gene: 119716502

Following gene: 119716515

Centisome position: 48.65

GC content: 66.04

Gene sequence:

>639_bases
GTGCGGTTGCTGTACGTGATCGTCGGTGTTGTCGTGGGGGTCAGCGTCCTGAACGCCCCTGCGTATGGGGAAGAGGAGCG
GTTGCGGGATGCCGTACGGCAGCTGTCGGTGGCTCGAGAGACCAACGTCGGTTACGACCGCGAGAAGTTCCAGCACTGGA
TCGACGTCGACGGCGACTGCCAGGACACCCGTGCCGAGGTCCTCATCGCAGAGTCCCGCGATGGGACGACGGGCGGGTGC
GTCGTCGCGACAGGGGAGTGGTTCTCTTACTACGACCGCGAGACGTGGACCGATGCGAGCGACGTCGATATCGATCACAT
GGTGGCGCTGGCCGAGGCGTGGGGTTCTGGTGCGAAGCGCTGGACTGGGGCGACCAGGAAGCGGTTCGCGAATGATCTGC
GCGACCGACGGGCGCTGGTCGCTGTCACAGACAACGTCAACCAGTCCAAGGGGGACCGCGACCCGGCTGAGTGGATGCCC
CAGTACGGCCAGTGCCGGTACCTCCGCGAGTGGGTCGCGATCAAGCTGCGGTGGAGCCTGAAGGTGAACCGGGCAGAGAG
GCGGCGGCTGGTGGAGCTGGCCGGTGGCTGCAGGAACAAGTCGCTTCGGTGGACACCTGCCCGCGTCGTGTACCGATAG

Upstream 100 bases:

>100_bases
GGCGGCCGTAGAGCGCATGCGTCGCCGGGCCGTCGGTGCTCATCGCTAACGTGACGCGGTGCCGTCGTCGTGGGTCGAGG
GCAGACGGAGGAGGAGATCG

Downstream 100 bases:

>100_bases
AAGCGGATTGATGCGCGGACGGCATTCGGACTGCGTGCGCACGTCTCCGCTGAGCTAGTCTTCGAGCGTGATCCCTCGGC
ACCAATGACAGCCCTGCAGA

Product: secreted protein

Products: NA

Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; Excalibur Domain Protein; Conserved Membrane Protein; S-Layer Domain Protein; Cation Transport ATPase

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRLLYVIVGVVVGVSVLNAPAYGEEERLRDAVRQLSVARETNVGYDREKFQHWIDVDGDCQDTRAEVLIAESRDGTTGGC
VVATGEWFSYYDRETWTDASDVDIDHMVALAEAWGSGAKRWTGATRKRFANDLRDRRALVAVTDNVNQSKGDRDPAEWMP
QYGQCRYLREWVAIKLRWSLKVNRAERRRLVELAGGCRNKSLRWTPARVVYR

Sequences:

>Translated_212_residues
MRLLYVIVGVVVGVSVLNAPAYGEEERLRDAVRQLSVARETNVGYDREKFQHWIDVDGDCQDTRAEVLIAESRDGTTGGC
VVATGEWFSYYDRETWTDASDVDIDHMVALAEAWGSGAKRWTGATRKRFANDLRDRRALVAVTDNVNQSKGDRDPAEWMP
QYGQCRYLREWVAIKLRWSLKVNRAERRRLVELAGGCRNKSLRWTPARVVYR
>Mature_212_residues
MRLLYVIVGVVVGVSVLNAPAYGEEERLRDAVRQLSVARETNVGYDREKFQHWIDVDGDCQDTRAEVLIAESRDGTTGGC
VVATGEWFSYYDRETWTDASDVDIDHMVALAEAWGSGAKRWTGATRKRFANDLRDRRALVAVTDNVNQSKGDRDPAEWMP
QYGQCRYLREWVAIKLRWSLKVNRAERRRLVELAGGCRNKSLRWTPARVVYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24300; Mature: 24300

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLYVIVGVVVGVSVLNAPAYGEEERLRDAVRQLSVARETNVGYDREKFQHWIDVDGDC
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
QDTRAEVLIAESRDGTTGGCVVATGEWFSYYDRETWTDASDVDIDHMVALAEAWGSGAKR
CCCCEEEEEEECCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
WTGATRKRFANDLRDRRALVAVTDNVNQSKGDRDPAEWMPQYGQCRYLREWVAIKLRWSL
HCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHEEEEEEEE
KVNRAERRRLVELAGGCRNKSLRWTPARVVYR
EECHHHHHHHHHHHCCCCCCCCCCCHHHEECC
>Mature Secondary Structure
MRLLYVIVGVVVGVSVLNAPAYGEEERLRDAVRQLSVARETNVGYDREKFQHWIDVDGDC
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
QDTRAEVLIAESRDGTTGGCVVATGEWFSYYDRETWTDASDVDIDHMVALAEAWGSGAKR
CCCCEEEEEEECCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
WTGATRKRFANDLRDRRALVAVTDNVNQSKGDRDPAEWMPQYGQCRYLREWVAIKLRWSL
HCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHEEEEEEEE
KVNRAERRRLVELAGGCRNKSLRWTPARVVYR
EECHHHHHHHHHHHCCCCCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA