Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716479

Identifier: 119716479

GI number: 119716479

Start: 2407103

End: 2407630

Strand: Direct

Name: 119716479

Synonym: Noca_2252

Alternate gene names: NA

Gene position: 2407103-2407630 (Clockwise)

Preceding gene: 119716478

Following gene: 119716487

Centisome position: 48.28

GC content: 74.43

Gene sequence:

>528_bases
GTGCCGGTTCGGCGGCTTGATGACGCCGGCCTCGCGGCGGTCGCGGCGGCGCTGGCGGACCCGGCAGTGATCACGCGCTA
CCGGGCAAAGGTCGCCACGGTGCCCGGCAGTGAGTGCCTGTGGTGGACCGGGGCCGTGGCTGGCCGCTCGGAGCGGGAGC
GCACGTCTGGCGGTGGCCACGGCCGGTTCTGGTACGCGCCGGGGCGGGTGATCATCGCCCACCGGTTCGCGTACGCGGTC
ATGCGCGGCGTGGAGGCGCTCGCGGAGGCGCGGCTGCTCGGGCATCGGTGTCACAACCCGCTGTGTCAGCGGATCGCACC
GGATCACGTCGTGGTGTCGAGCGCGGCGCAGAACCGCCGGGAGTGGTCGGTGCAGCGGCGGCTGCCGTACAGCCCGCTGG
CCGACCCGCGTGGGCCGCGTCGGCGGGCGCGGGAACTGCGCGACCTGGCGCGTGAGGACCCGCAGCTGGTTGCCGACGAC
CTCGCGCGGCTCCAGGAGTTGCTGGGCGAGCAACTGACGCTCTGGTGA

Upstream 100 bases:

>100_bases
CGGCTGCGGCGACTGGCCGCACCGGACGGCAGCGCGGAGGCTGAGGGCGGCGCGGCCGCAGAGCGGGAGCCCGACGCAGC
GGCCGAGAACGGGGGAGCGG

Downstream 100 bases:

>100_bases
CGAGCCCGACGCAGAAGGCCGCCCGCACCGTCGAGGGTGCGGGCGGCCTTGCGATTGTTGGTCAGGCTGGCTCGCCGTCG
AGGAGCCGACCGAGCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MPVRRLDDAGLAAVAAALADPAVITRYRAKVATVPGSECLWWTGAVAGRSERERTSGGGHGRFWYAPGRVIIAHRFAYAV
MRGVEALAEARLLGHRCHNPLCQRIAPDHVVVSSAAQNRREWSVQRRLPYSPLADPRGPRRRARELRDLAREDPQLVADD
LARLQELLGEQLTLW

Sequences:

>Translated_175_residues
MPVRRLDDAGLAAVAAALADPAVITRYRAKVATVPGSECLWWTGAVAGRSERERTSGGGHGRFWYAPGRVIIAHRFAYAV
MRGVEALAEARLLGHRCHNPLCQRIAPDHVVVSSAAQNRREWSVQRRLPYSPLADPRGPRRRARELRDLAREDPQLVADD
LARLQELLGEQLTLW
>Mature_174_residues
PVRRLDDAGLAAVAAALADPAVITRYRAKVATVPGSECLWWTGAVAGRSERERTSGGGHGRFWYAPGRVIIAHRFAYAVM
RGVEALAEARLLGHRCHNPLCQRIAPDHVVVSSAAQNRREWSVQRRLPYSPLADPRGPRRRARELRDLAREDPQLVADDL
ARLQELLGEQLTLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19502; Mature: 19370

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRRLDDAGLAAVAAALADPAVITRYRAKVATVPGSECLWWTGAVAGRSERERTSGGGH
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHCCCCCC
GRFWYAPGRVIIAHRFAYAVMRGVEALAEARLLGHRCHNPLCQRIAPDHVVVSSAAQNRR
CEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHH
EWSVQRRLPYSPLADPRGPRRRARELRDLAREDPQLVADDLARLQELLGEQLTLW
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVRRLDDAGLAAVAAALADPAVITRYRAKVATVPGSECLWWTGAVAGRSERERTSGGGH
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHCCCCCC
GRFWYAPGRVIIAHRFAYAVMRGVEALAEARLLGHRCHNPLCQRIAPDHVVVSSAAQNRR
CEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHH
EWSVQRRLPYSPLADPRGPRRRARELRDLAREDPQLVADDLARLQELLGEQLTLW
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA