Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716470

Identifier: 119716470

GI number: 119716470

Start: 2390875

End: 2392413

Strand: Direct

Name: 119716470

Synonym: Noca_2243

Alternate gene names: NA

Gene position: 2390875-2392413 (Clockwise)

Preceding gene: 119716469

Following gene: 119716471

Centisome position: 47.95

GC content: 70.5

Gene sequence:

>1539_bases
ATGACCACCACCCCCCGCCGGAACCGCCGCGGCGGCCGCGACATGGCCGCCCTGCTCTCCGACTTCGGGCACGACCTGCC
CACGATCCCCACGCTCGCCCCGGAGGCCAAGGAGCCCCGGCTCTTCCGCTACGCGCCGCGCCGCGGTGCCACCCGCCGCG
GCCGAGGCTGGGCCGCCGCCACCGCCCCGGCGATGGCCTGGCGGATGACCAGCGACCAGGCCCCGGTGTTCTGGCCCTTC
GTCTCCGCTCCCGCCCTGCCCCCGACGGGCGCCCAGATGGGCGTCGACCAGCTCTCCGGCGGCAGCTTCTACTGCGACCC
GTTCGGGTGGGTGCTGCGCGACGACGTACCCGCGACCAACCCCAACATCTTCCAGTTCGCCAAGCCGGGAAGTGGCAAGT
CCGGCACCACCAAGGCGTTCTGCACCCGGATGATGCCGTTCGGCTACCGCACCCTGGTCACTGGCGACGTCAAGGACGAG
TACGAGTCGCTGTGCCGCGCGCTCGGTGTCGACCCCTTCGTCATCGCCCCCGGCTTCTGGGCCCGGGTCAACCCGCTGTC
CATGGGGCCGCTCGGCGACGGCTGGGAGAAGCTCTCGGCCGAGGAGGCGCAGCGCCGCGCCACGATCATCTTCAAGCGGT
GGCTCGTCCTGGTCCGCGGCCTGGTCGGCAGCATGAAGATCGACGATGAGCGCCGGGTGCCCTTCGGCCCCGACGAATCC
GACGTCGTGCGCAACGCGCTGGCGATCCTCACCGGCTACGCCGCCGGCAACAGCGTCCTGCAAGAGACGACCATCCCGCG
GCTGTGGGACCTGCTGCGCAACCCCACGGAGGAGCTCGTCCGTGCCTGCGAATACGCGAACACCCGCCAGTTCCTCGACG
AGACCCGGCGGCTGCGCAACGCGCTCGGCGAGCTGGTCACCGGCACCCTCGCCGGCCTCTTCGACGACTTCACCAACATC
GAGGTCGACTGGCGGGCCCCGATCCAGTCGTTCAGCCTCTCCCGGCTCGACGGCCTGGGCGATGAGGCCGTGGGCATCGC
GCTGCTGTGCATGAACTCCTGGGGGCGTGGTCTGCGGGAGATCGCCGAGCCAGGCGACCTGCGCATCGTGGTGCGCGACG
AGGTCTGGAAGCAGATGCGCCTCGGAACCGCCGCAGTAGCGAGCTTCGACGCCGACCTGCGGCTCTCACGCGGCATGGCC
GGCAAGGGCGGCGACATCCAGTTCTGCAACCTCCACAAGCCCTCCGACCTGCTCTCGGTCGGCGACGCCGACTCCCAGGC
CGCGATGATCGCCAAGGACCTCCTCGAGCTGGCCGACATCAAGATCCTCGGTGCCCAGAAGCCCCGTGTCGCCCGCGAGC
TCGACTCCATGCTCGGGCTCGGCCCGATCGCCCAGGACCTCGTCTCCGGGTGGGCCATGCAGGACAAGGGCCGCGCCCTG
TGGTGCATCGGCGACGCCACCTACAAGGTCCAGACGGTGCTCCACCCGCTGGAGAAGAAGCTCTACTACACCAACGAGGC
CATCGAGTCCGCCGCCTGA

Upstream 100 bases:

>100_bases
CCGGGTTCGCACCGCTGCGCCTCGACCTCGCCCAGGACGTCGGGTTCGCCGCGTCCACCATCCCCCTCGGCTCGAGCCTG
ACCCGGAGCGGAGACGCCTG

Downstream 100 bases:

>100_bases
GCGCGCGCGACCTCGGGACTGACCTGTCATGAAGAAGCTGCTGCTCGCGGGACTGCCCGTCCTGATCATCTTCATGGGGC
TGCCGTTCCTCGTGACGCTG

Product: ATP-binding protein

Products: NA

Alternate protein names: ATPase; Type IV Secretory Pathway VirB4 Components-Like Protein; Type IV Secretory Pathway VirB4 Component-Like Protein

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MTTTPRRNRRGGRDMAALLSDFGHDLPTIPTLAPEAKEPRLFRYAPRRGATRRGRGWAAATAPAMAWRMTSDQAPVFWPF
VSAPALPPTGAQMGVDQLSGGSFYCDPFGWVLRDDVPATNPNIFQFAKPGSGKSGTTKAFCTRMMPFGYRTLVTGDVKDE
YESLCRALGVDPFVIAPGFWARVNPLSMGPLGDGWEKLSAEEAQRRATIIFKRWLVLVRGLVGSMKIDDERRVPFGPDES
DVVRNALAILTGYAAGNSVLQETTIPRLWDLLRNPTEELVRACEYANTRQFLDETRRLRNALGELVTGTLAGLFDDFTNI
EVDWRAPIQSFSLSRLDGLGDEAVGIALLCMNSWGRGLREIAEPGDLRIVVRDEVWKQMRLGTAAVASFDADLRLSRGMA
GKGGDIQFCNLHKPSDLLSVGDADSQAAMIAKDLLELADIKILGAQKPRVARELDSMLGLGPIAQDLVSGWAMQDKGRAL
WCIGDATYKVQTVLHPLEKKLYYTNEAIESAA

Sequences:

>Translated_512_residues
MTTTPRRNRRGGRDMAALLSDFGHDLPTIPTLAPEAKEPRLFRYAPRRGATRRGRGWAAATAPAMAWRMTSDQAPVFWPF
VSAPALPPTGAQMGVDQLSGGSFYCDPFGWVLRDDVPATNPNIFQFAKPGSGKSGTTKAFCTRMMPFGYRTLVTGDVKDE
YESLCRALGVDPFVIAPGFWARVNPLSMGPLGDGWEKLSAEEAQRRATIIFKRWLVLVRGLVGSMKIDDERRVPFGPDES
DVVRNALAILTGYAAGNSVLQETTIPRLWDLLRNPTEELVRACEYANTRQFLDETRRLRNALGELVTGTLAGLFDDFTNI
EVDWRAPIQSFSLSRLDGLGDEAVGIALLCMNSWGRGLREIAEPGDLRIVVRDEVWKQMRLGTAAVASFDADLRLSRGMA
GKGGDIQFCNLHKPSDLLSVGDADSQAAMIAKDLLELADIKILGAQKPRVARELDSMLGLGPIAQDLVSGWAMQDKGRAL
WCIGDATYKVQTVLHPLEKKLYYTNEAIESAA
>Mature_511_residues
TTTPRRNRRGGRDMAALLSDFGHDLPTIPTLAPEAKEPRLFRYAPRRGATRRGRGWAAATAPAMAWRMTSDQAPVFWPFV
SAPALPPTGAQMGVDQLSGGSFYCDPFGWVLRDDVPATNPNIFQFAKPGSGKSGTTKAFCTRMMPFGYRTLVTGDVKDEY
ESLCRALGVDPFVIAPGFWARVNPLSMGPLGDGWEKLSAEEAQRRATIIFKRWLVLVRGLVGSMKIDDERRVPFGPDESD
VVRNALAILTGYAAGNSVLQETTIPRLWDLLRNPTEELVRACEYANTRQFLDETRRLRNALGELVTGTLAGLFDDFTNIE
VDWRAPIQSFSLSRLDGLGDEAVGIALLCMNSWGRGLREIAEPGDLRIVVRDEVWKQMRLGTAAVASFDADLRLSRGMAG
KGGDIQFCNLHKPSDLLSVGDADSQAAMIAKDLLELADIKILGAQKPRVARELDSMLGLGPIAQDLVSGWAMQDKGRALW
CIGDATYKVQTVLHPLEKKLYYTNEAIESAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56266; Mature: 56135

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPRRNRRGGRDMAALLSDFGHDLPTIPTLAPEAKEPRLFRYAPRRGATRRGRGWAAA
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
TAPAMAWRMTSDQAPVFWPFVSAPALPPTGAQMGVDQLSGGSFYCDPFGWVLRDDVPATN
CCCHHEEEECCCCCCEEEEECCCCCCCCCCCHHCHHHCCCCCEEECCCCCCEECCCCCCC
PNIFQFAKPGSGKSGTTKAFCTRMMPFGYRTLVTGDVKDEYESLCRALGVDPFVIAPGFW
CCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCCC
ARVNPLSMGPLGDGWEKLSAEEAQRRATIIFKRWLVLVRGLVGSMKIDDERRVPFGPDES
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHH
DVVRNALAILTGYAAGNSVLQETTIPRLWDLLRNPTEELVRACEYANTRQFLDETRRLRN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHH
ALGELVTGTLAGLFDDFTNIEVDWRAPIQSFSLSRLDGLGDEAVGIALLCMNSWGRGLRE
HHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IAEPGDLRIVVRDEVWKQMRLGTAAVASFDADLRLSRGMAGKGGDIQFCNLHKPSDLLSV
HCCCCCEEEEEHHHHHHHHHCCHHHHHHCCCCHHHHCCCCCCCCCEEEEECCCCHHHHCC
GDADSQAAMIAKDLLELADIKILGAQKPRVARELDSMLGLGPIAQDLVSGWAMQDKGRAL
CCCCHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEE
WCIGDATYKVQTVLHPLEKKLYYTNEAIESAA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTTPRRNRRGGRDMAALLSDFGHDLPTIPTLAPEAKEPRLFRYAPRRGATRRGRGWAAA
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
TAPAMAWRMTSDQAPVFWPFVSAPALPPTGAQMGVDQLSGGSFYCDPFGWVLRDDVPATN
CCCHHEEEECCCCCCEEEEECCCCCCCCCCCHHCHHHCCCCCEEECCCCCCEECCCCCCC
PNIFQFAKPGSGKSGTTKAFCTRMMPFGYRTLVTGDVKDEYESLCRALGVDPFVIAPGFW
CCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCCC
ARVNPLSMGPLGDGWEKLSAEEAQRRATIIFKRWLVLVRGLVGSMKIDDERRVPFGPDES
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHH
DVVRNALAILTGYAAGNSVLQETTIPRLWDLLRNPTEELVRACEYANTRQFLDETRRLRN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHH
ALGELVTGTLAGLFDDFTNIEVDWRAPIQSFSLSRLDGLGDEAVGIALLCMNSWGRGLRE
HHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IAEPGDLRIVVRDEVWKQMRLGTAAVASFDADLRLSRGMAGKGGDIQFCNLHKPSDLLSV
HCCCCCEEEEEHHHHHHHHHCCHHHHHHCCCCHHHHCCCCCCCCCEEEEECCCCHHHHCC
GDADSQAAMIAKDLLELADIKILGAQKPRVARELDSMLGLGPIAQDLVSGWAMQDKGRAL
CCCCHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEE
WCIGDATYKVQTVLHPLEKKLYYTNEAIESAA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA