| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716468
Identifier: 119716468
GI number: 119716468
Start: 2387334
End: 2389304
Strand: Direct
Name: 119716468
Synonym: Noca_2241
Alternate gene names: NA
Gene position: 2387334-2389304 (Clockwise)
Preceding gene: 119716467
Following gene: 119716469
Centisome position: 47.88
GC content: 72.55
Gene sequence:
>1971_bases GTGAGCACCGTCATCACCGCCGTGCGCCGGGCGAGCCGACTCGGCATCGCGGCCCTGGCGCTCCTGGTGCTCACCACGCT CCTCGGAGCTGCCTCGACCCTCCAGCCTCCCGCCGCAGCGGCCAGCGAGCCGGCCGCCAGCACGGCGCACCTCGCTCCAG TCGCCCCGGCGGCGACCAGCGGCACTCAGCCGACCCGCAACCTCAAGATGGGCTGCCCGGGGCCCGACGCCCTATGCGAC CTCGGCAGCGACGCCGTCGACTGCGCCAAGGACCCGATCGATTGCGGCAAGGACGCCGCCGGCGATGTGAAGGACGGTGC CGGCGACCTGCTCGACGGCGCAGGAGATCTGCTCCCCGACGGCTGCGGGATCCTCGACGCGATCTGCGGCAACATCGGCG GACTGCCCGGGCTTTCGGGCGTCCCTGGGCTGCCCGGGATCCCCGGTCTGCCGAACGTCGGTGACCTCTTCGGCGGCGGC ATCCCCGGGCTGGGCGACATCCCCAACCCGTTCGAGGCCATCGGCGACGTCATCGCCAAGGCCGCGGCCGACGCCTGGAC CGCGGCCATGCTCGCGATCTGGAACTCCGGCCTGTTCGTGCTGCGCATCGTGCTCACGTTCAGTGAGCTGTTCTTGACTC CGGACCTGAGCGCCGACGGCCCGGGCAAGGACGTCTACGCCTTCACCCTGTGGCTGGCGCTGGCCCTGGTGGTCATCTTG GCGATGATCCAGCTCGGCGCCGCCGCCTTCAAGCGCGAGGGCAAGAGCCTCGCCCGGGCCTTCATCGGGTCCGGCCAGTT CGTCTTGGTGTGCGCCAGCTGGTTCGGGTACTGCGTCATGATCATCGCGGCCTGCGGGGCGCTGACCAAGGCGCTGATGA AGTCGCTGCTCAAGGTGCAGACCTGGCCCGACTGGGACCCGCTCGGCGGACTCGGCATCGACGACATCACCGACGCCGGC GTGGCCACCGCGCTGGCATTCCTCGGGATCTTCCTGTGGCTGGCCGCCATCGGGCACGTCCTGGTCTACCTGGCCCGCGC GGCGTCCCTGCTGGTGCTCACCGCCACGGGGCCGCTCGCGGCCGCCGGCCTGGTCTCGGAGTTCACCCGCTCCTGGTTCT GGAAGTCGCTGCGCTGGTTCCACGCCGCGGCGTTCACCCCGGTGCTGATGGTGATGGTGCTGGGCATCGGCGTGCAGTTC GCCAACGGAGTCGCCGCCCACCTAGCCGAGGACACCGCCAAGGCGTTCGGCACCGCGCTGCCGGCCGTGATGACGATCCT GATCAGCGTCGTCGCCCCGCTGTCCCTGTTCAAGCTCCTTGCCTTCGTCGACCCCGGCACCCCCAGCGGCGCGTCCTTTC GCCAGGGCATGGCCATCCAGGGCGGCCTCCAGGGCCTGCTCAGCGGCGGCGGCGCGGGCGGAGGCTCGTCGGCTGCGTCG ACCACCGACGCCAACGGCCGCTCCTCGGGCGAGCAGAGTGCCGAGGCCTCGACCGGCGACCGGTTCAGCAAATCGACCCA GGGCGCCCTGGGCAGCTTCGGCCCGGTGGGCCAGGCCCTGTCGACCGGCATGGGCTGGATCAACTCCGCCGGCGCGAAGG CGACCTCGCTGATGTCGGACGAAACCAACCAGGCCGGTGTCGGCCAGAGCACCTACGGCCCCGACTTCAGCGGCCTGAGT GGACGGCAGTCCGGTGGCCAGTCCGGCGGCCAGGGCGGGACCCACCCCGGGTCGCAGAACGGCGACCAGAGCGACGGGGA TTCGTCGATGCCGACCCCGCCCACGCCTCCTGCGCCGCCCACCCCGCCGACGCTGCCCACTGGCGGCGGACCCGGCGGCG GTTCAGGTGGCCAGGGCGGCAGGGGAGCTGACGCAGCTCCCAAGACCCCGGCCGCCGGCGGCGGGGGAGCAGCAGGAGGT GCCGGCGGCGCCGGCGCGGCCGCTGGCGGCATTCCACCGGTGGCGGGGTAA
Upstream 100 bases:
>100_bases ACATCGAGCACCTGGTCTCGGAGGGCCAGCCGCAGGCGGTGGCGCCCGGCACCCCCGAGTTCGCGAAGGCCGGCTGGATC CGGATCAACGGAGCTCCCCA
Downstream 100 bases:
>100_bases CCGATGCACCGACCGCCCCACCTCGAGCACCGATCGACACCCACCGACCAGAAGGGAAGCCGACGATGACCACCTACGCC GACTACCAGCGCGACCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MSTVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATSGTQPTRNLKMGCPGPDALCD LGSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPDGCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGG IPGLGDIPNPFEAIGDVIAKAAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVIL AMIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQTWPDWDPLGGLGIDDITDAG VATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLAAAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQF ANGVAAHLAEDTAKAFGTALPAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAS TTDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSDETNQAGVGQSTYGPDFSGLS GRQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPPTPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGG AGGAGAAAGGIPPVAG
Sequences:
>Translated_656_residues MSTVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATSGTQPTRNLKMGCPGPDALCD LGSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPDGCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGG IPGLGDIPNPFEAIGDVIAKAAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVIL AMIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQTWPDWDPLGGLGIDDITDAG VATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLAAAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQF ANGVAAHLAEDTAKAFGTALPAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAS TTDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSDETNQAGVGQSTYGPDFSGLS GRQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPPTPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGG AGGAGAAAGGIPPVAG >Mature_655_residues STVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATSGTQPTRNLKMGCPGPDALCDL GSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPDGCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGGI PGLGDIPNPFEAIGDVIAKAAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVILA MIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQTWPDWDPLGGLGIDDITDAGV ATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLAAAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQFA NGVAAHLAEDTAKAFGTALPAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAST TDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSDETNQAGVGQSTYGPDFSGLSG RQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPPTPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGGA GGAGAAAGGIPPVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64303; Mature: 64172
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCC GTQPTRNLKMGCPGPDALCDLGSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPD CCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCHHCCCCCCCCCCCCCHHHHHCCHHCCCC GCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGGIPGLGDIPNPFEAIGDVIAK CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH AAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVIL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH AMIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TWPDWDPLGGLGIDDITDAGVATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH AAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQFANGVAAHLAEDTAKAFGTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCC TTDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSD CCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCHHHHHHCC ETNQAGVGQSTYGPDFSGLSGRQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGGAGGAGAAAGGIPPVAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STVITAVRRASRLGIAALALLVLTTLLGAASTLQPPAAAASEPAASTAHLAPVAPAATS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCC GTQPTRNLKMGCPGPDALCDLGSDAVDCAKDPIDCGKDAAGDVKDGAGDLLDGAGDLLPD CCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCHHCCCCCCCCCCCCCHHHHHCCHHCCCC GCGILDAICGNIGGLPGLSGVPGLPGIPGLPNVGDLFGGGIPGLGDIPNPFEAIGDVIAK CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH AAADAWTAAMLAIWNSGLFVLRIVLTFSELFLTPDLSADGPGKDVYAFTLWLALALVVIL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH AMIQLGAAAFKREGKSLARAFIGSGQFVLVCASWFGYCVMIIAACGALTKALMKSLLKVQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TWPDWDPLGGLGIDDITDAGVATALAFLGIFLWLAAIGHVLVYLARAASLLVLTATGPLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH AAGLVSEFTRSWFWKSLRWFHAAAFTPVLMVMVLGIGVQFANGVAAHLAEDTAKAFGTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAVMTILISVVAPLSLFKLLAFVDPGTPSGASFRQGMAIQGGLQGLLSGGGAGGGSSAAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCC TTDANGRSSGEQSAEASTGDRFSKSTQGALGSFGPVGQALSTGMGWINSAGAKATSLMSD CCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCHHHHHHCC ETNQAGVGQSTYGPDFSGLSGRQSGGQSGGQGGTHPGSQNGDQSDGDSSMPTPPTPPAPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPTLPTGGGPGGGSGGQGGRGADAAPKTPAAGGGGAAGGAGGAGAAAGGIPPVAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA