Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716458

Identifier: 119716458

GI number: 119716458

Start: 2377407

End: 2377682

Strand: Direct

Name: 119716458

Synonym: Noca_2230

Alternate gene names: NA

Gene position: 2377407-2377682 (Clockwise)

Preceding gene: 119716457

Following gene: 119716459

Centisome position: 47.68

GC content: 69.57

Gene sequence:

>276_bases
ATGACCACCTTCAACCAGGAGCTCACCGGCCGCTACGTCGCGGCCGGCGGCGACCGCCCCGACCTCGACGCCCGACGCGT
CGCCAGAGCCGTCTTCGTCCGCGACACCATCCGCACCCTCTACGACGCCGACAAGCGATTCGGCATCGACCCCGCCGACA
GCGGCTCGCTGGCCGAGCTCGTCGACGCCGCCGAAGAACACCTCGAGCACATCGCCACCGACGTCAGCCAGCGATCAGTC
ATGGCGCCGCCCAACACAGGAGGAGACCCCGCATGA

Upstream 100 bases:

>100_bases
GATGACGGCGACGCCCCCATGGAACTGTCGGAGCGCACTAAGACCATCATCAGTACCCACGGCTGGCTCGCGAGCTGACT
CGGGAAGGGAGCACCAGCAC

Downstream 100 bases:

>100_bases
GGAAGCACCACTCCGCACTTGGGGGAGTGGCCCTCGCCCTCGCCCTCACCCTCACGGGCTGCTCGGACGACGGCACCGAC
CCCGAGGCCGAGGACACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTTFNQELTGRYVAAGGDRPDLDARRVARAVFVRDTIRTLYDADKRFGIDPADSGSLAELVDAAEEHLEHIATDVSQRSV
MAPPNTGGDPA

Sequences:

>Translated_91_residues
MTTFNQELTGRYVAAGGDRPDLDARRVARAVFVRDTIRTLYDADKRFGIDPADSGSLAELVDAAEEHLEHIATDVSQRSV
MAPPNTGGDPA
>Mature_90_residues
TTFNQELTGRYVAAGGDRPDLDARRVARAVFVRDTIRTLYDADKRFGIDPADSGSLAELVDAAEEHLEHIATDVSQRSVM
APPNTGGDPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9830; Mature: 9699

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFNQELTGRYVAAGGDRPDLDARRVARAVFVRDTIRTLYDADKRFGIDPADSGSLAEL
CCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VDAAEEHLEHIATDVSQRSVMAPPNTGGDPA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTFNQELTGRYVAAGGDRPDLDARRVARAVFVRDTIRTLYDADKRFGIDPADSGSLAEL
CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VDAAEEHLEHIATDVSQRSVMAPPNTGGDPA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA