| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716442
Identifier: 119716442
GI number: 119716442
Start: 2362133
End: 2362858
Strand: Direct
Name: 119716442
Synonym: Noca_2213
Alternate gene names: NA
Gene position: 2362133-2362858 (Clockwise)
Preceding gene: 119716441
Following gene: 119716444
Centisome position: 47.38
GC content: 66.25
Gene sequence:
>726_bases ATGCGACGGCTGCCTGCACTGGTCGTGACCCTGGTCGTGGTCGCAGTAGTGACCACCATGGCCGCTGTCGGCGCGATTGC ATGGGCTATCCAAGGCAACGACTCGCAGGGGCGGATGGGGCCCGGGATGATGGCTAGCGGCTCCAGCAGTACACCTGGTT GGTGGGACGACTCCTGGGGCTCGATGATGGGAATGATGAGCTCGGCCGGCGTGGCCAGCGAGCCCGAGTACCTGGCCGAG ATGGTCGCCCACCACCAGGAGGCGGTCACCGCCGCAGGCGAACTCGCCCGCTCAGACCGGGCCGAGATGCGGGCCTTCGG CGAGTCGATCGTGAAGACCCAGTCCGCGCAGATCCAGCAGATGCGGTCCTGGCTCAAGGACTGGTACCCGGAGCAGTCCA CCGGGCTCGACTATCGGCCGATGATGCGCGACCTGTCCGAACTCTCCGGCGACCAGCTCGACCAGGCGTTCTTGCAAGAC ATGATCGGCCACCACATGGCCGCGGTGATGATGTCCCAGCAATTGCTCTGGCGCGGCACTGACCATGGCGAGGTGGCAGA GCTGGCCCGAACCATCCGAGATGACCAACACACCGAGATCGTCCAGATGCAGCGCTGGCTCGCGCAGTGGTTTGACACCG ACTGGCGCGGCGGCATGGGCTGCGGCACCTGGTCTGATCAGGGCTGGGGCATGGGCCCGGGGATGATGTGGGGATCTGGG CGCTGA
Upstream 100 bases:
>100_bases GACCTCCGACCCTCGGTCGTGGGCAGATCTGCCCTACCGGTGATGCCGTGTGGGCAAAACCGTGGAGTCTGAGAAGCGCC CCGGAACTCAGGAGACTCCC
Downstream 100 bases:
>100_bases GGCGGCACCAGATGGTGGAGTCTATGCTTCGCAGCGGTGTGAGCCGGAGCTGTCGAAGCGCTTGCATCCGGTACACCTAG GTACGGTCTTAGAGCTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRRLPALVVTLVVVAVVTTMAAVGAIAWAIQGNDSQGRMGPGMMASGSSSTPGWWDDSWGSMMGMMSSAGVASEPEYLAE MVAHHQEAVTAAGELARSDRAEMRAFGESIVKTQSAQIQQMRSWLKDWYPEQSTGLDYRPMMRDLSELSGDQLDQAFLQD MIGHHMAAVMMSQQLLWRGTDHGEVAELARTIRDDQHTEIVQMQRWLAQWFDTDWRGGMGCGTWSDQGWGMGPGMMWGSG R
Sequences:
>Translated_241_residues MRRLPALVVTLVVVAVVTTMAAVGAIAWAIQGNDSQGRMGPGMMASGSSSTPGWWDDSWGSMMGMMSSAGVASEPEYLAE MVAHHQEAVTAAGELARSDRAEMRAFGESIVKTQSAQIQQMRSWLKDWYPEQSTGLDYRPMMRDLSELSGDQLDQAFLQD MIGHHMAAVMMSQQLLWRGTDHGEVAELARTIRDDQHTEIVQMQRWLAQWFDTDWRGGMGCGTWSDQGWGMGPGMMWGSG R >Mature_241_residues MRRLPALVVTLVVVAVVTTMAAVGAIAWAIQGNDSQGRMGPGMMASGSSSTPGWWDDSWGSMMGMMSSAGVASEPEYLAE MVAHHQEAVTAAGELARSDRAEMRAFGESIVKTQSAQIQQMRSWLKDWYPEQSTGLDYRPMMRDLSELSGDQLDQAFLQD MIGHHMAAVMMSQQLLWRGTDHGEVAELARTIRDDQHTEIVQMQRWLAQWFDTDWRGGMGCGTWSDQGWGMGPGMMWGSG R
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26653; Mature: 26653
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 9.5 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 9.5 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLPALVVTLVVVAVVTTMAAVGAIAWAIQGNDSQGRMGPGMMASGSSSTPGWWDDSWG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH SMMGMMSSAGVASEPEYLAEMVAHHQEAVTAAGELARSDRAEMRAFGESIVKTQSAQIQQ HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRSWLKDWYPEQSTGLDYRPMMRDLSELSGDQLDQAFLQDMIGHHMAAVMMSQQLLWRGT HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHGEVAELARTIRDDQHTEIVQMQRWLAQWFDTDWRGGMGCGTWSDQGWGMGPGMMWGSG CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC R C >Mature Secondary Structure MRRLPALVVTLVVVAVVTTMAAVGAIAWAIQGNDSQGRMGPGMMASGSSSTPGWWDDSWG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH SMMGMMSSAGVASEPEYLAEMVAHHQEAVTAAGELARSDRAEMRAFGESIVKTQSAQIQQ HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRSWLKDWYPEQSTGLDYRPMMRDLSELSGDQLDQAFLQDMIGHHMAAVMMSQQLLWRGT HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHGEVAELARTIRDDQHTEIVQMQRWLAQWFDTDWRGGMGCGTWSDQGWGMGPGMMWGSG CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA