| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716414
Identifier: 119716414
GI number: 119716414
Start: 2336779
End: 2337132
Strand: Reverse
Name: 119716414
Synonym: Noca_2184
Alternate gene names: NA
Gene position: 2337132-2336779 (Counterclockwise)
Preceding gene: 119716415
Following gene: 119716413
Centisome position: 46.88
GC content: 68.64
Gene sequence:
>354_bases ATGTTCATCGCCCTCGTCATCGCCACCGTCCTGCTCGCTTTCCTCGCCGTCAACTCCGCGGCAATGAAGCTGCGCCAGAA CGAGCAGGTCGTCACCAGCATCCACAAGACCGTTGGCGTCCCGATGCGCTACATCCCCGTCCTGGCCGCCCTCGAAGTCG CCGGTGCCATCGGCATCGTCGCCGGTCTGTGGCTCGAGCCCCTCGGCATCGCCGCCGCGGCCGGCCTGACTGCCTACTTC CTCGGTGCCATGGGCGGCCACCTGCGCGTCGGCGACACCAAGGGCCTGGCCATGCCGCTGGTCCCGCTCGTGCTGTCGGT CGCAGTCCTGGTGCTGCGCATCGTCACCGCCTGA
Upstream 100 bases:
>100_bases CGACCTCCTGGGCACTGAGGTGCTCCCCCAAATCCGCAAAGAGCTCGGCCAGTAGGCCGGCCACACCACCAGCTGTCCCC TCCACCGAAGGAAACGAACC
Downstream 100 bases:
>100_bases ACATCCATCCCTGCCCGACCCACCACCCGATCCACCCATCCACAGGAGGAACACCATGAAGGCATTCGCCATCACCGCCC GCGACACCCAGCCCACCGTC
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MFIALVIATVLLAFLAVNSAAMKLRQNEQVVTSIHKTVGVPMRYIPVLAALEVAGAIGIVAGLWLEPLGIAAAAGLTAYF LGAMGGHLRVGDTKGLAMPLVPLVLSVAVLVLRIVTA
Sequences:
>Translated_117_residues MFIALVIATVLLAFLAVNSAAMKLRQNEQVVTSIHKTVGVPMRYIPVLAALEVAGAIGIVAGLWLEPLGIAAAAGLTAYF LGAMGGHLRVGDTKGLAMPLVPLVLSVAVLVLRIVTA >Mature_117_residues MFIALVIATVLLAFLAVNSAAMKLRQNEQVVTSIHKTVGVPMRYIPVLAALEVAGAIGIVAGLWLEPLGIAAAAGLTAYF LGAMGGHLRVGDTKGLAMPLVPLVLSVAVLVLRIVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12042; Mature: 12042
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIALVIATVLLAFLAVNSAAMKLRQNEQVVTSIHKTVGVPMRYIPVLAALEVAGAIGIV CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGLWLEPLGIAAAAGLTAYFLGAMGGHLRVGDTKGLAMPLVPLVLSVAVLVLRIVTA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFIALVIATVLLAFLAVNSAAMKLRQNEQVVTSIHKTVGVPMRYIPVLAALEVAGAIGIV CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGLWLEPLGIAAAAGLTAYFLGAMGGHLRVGDTKGLAMPLVPLVLSVAVLVLRIVTA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA