| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is qorB [H]
Identifier: 119716411
GI number: 119716411
Start: 2334239
End: 2335093
Strand: Reverse
Name: qorB [H]
Synonym: Noca_2181
Alternate gene names: 119716411
Gene position: 2335093-2334239 (Counterclockwise)
Preceding gene: 119716412
Following gene: 119716410
Centisome position: 46.83
GC content: 70.99
Gene sequence:
>855_bases ATGACCATCGCCATCGTCGGCGCCACCGGACAGCTCGGCGGCCTCACCATCGACGCGCTCCTCGGGCGCGGCATCCCCGC AGGCGACATCCTCGCCCTCGGTCGAAACGCCGATCGCCTCAGCGCCCTCGCCGACCGAGGAGTGCGCACCGCTGCTCTCG ACCTCGACGACGTCGAGGGCACCACAGCCGCACTCGCCGACGTCGACAGGCTGCTGCTGATCTCCGTCGGGGCACCCGGG CAAGCCCTCGGACCGCGCCGCAACGCCATCGAGGCAGCCCGCCGCGCCGGCGTCGGACACATGATCTACACCTCCGCGCT GCAGGCGCCGACCACCATCCTCGGCCTCGCTGCCGAGCACAAGGCCACCGAGGAGCTCATCACCGCCTCTGGCATCCCGG CGACCTTCCTGCGCAACGGCTGGTACACCGAGAACCACCAGCAGGACTTCGCTGCCGCCCGGGACCAGGGGGTCATCGCC AACAGTGTCGGCGACGGGCGTCTCGCGACCGCACCCCGCAAGGACTTCGCCGAAGCCGGCGCTGTGGTGCTGACCAGCAC CGGTCACGAGGGGCAGGCCTACGAGCTCTCCGGTGACACCGCATGGAGCTACGAAGAGTTCGCCGGCGTCGCCGGGCAGG TGCTGGACCAGCCCGTGCGCTACCAGGCACTGACCCCCGAGCAGGAGCACGACCAGATGCTCGCGTTCGGTCTCGACGAG GGGACCGCCGGCTTCATGGTCGCCCTCCACGGCAACATGCGCGACGGCGCCCTCGCACCTACCCCGGGCGACCTCGCCCG CCTCATCGGTCACCCCACCGAGCCCCTGGCGACTACCTTGCGCACGTGGGTCTGA
Upstream 100 bases:
>100_bases GCCGACATCGCCGCCTTCACCGCTGGGCAGGTCGACGACACCACCTATGTCCACCGCGCCCCCGCCATCAGCAACTGACA ACTACAAAGGAACTCAACTC
Downstream 100 bases:
>100_bases CCACTCAGCCGTCGGCGACAGGTTCACGCTCGGAATGACTCCTCTGATGCTTGTCGCCGCTGCGACTGCGGCCTCATCCG ATGACCCTGCAGCACGGTTG
Product: NmrA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTIAIVGATGQLGGLTIDALLGRGIPAGDILALGRNADRLSALADRGVRTAALDLDDVEGTTAALADVDRLLLISVGAPG QALGPRRNAIEAARRAGVGHMIYTSALQAPTTILGLAAEHKATEELITASGIPATFLRNGWYTENHQQDFAAARDQGVIA NSVGDGRLATAPRKDFAEAGAVVLTSTGHEGQAYELSGDTAWSYEEFAGVAGQVLDQPVRYQALTPEQEHDQMLAFGLDE GTAGFMVALHGNMRDGALAPTPGDLARLIGHPTEPLATTLRTWV
Sequences:
>Translated_284_residues MTIAIVGATGQLGGLTIDALLGRGIPAGDILALGRNADRLSALADRGVRTAALDLDDVEGTTAALADVDRLLLISVGAPG QALGPRRNAIEAARRAGVGHMIYTSALQAPTTILGLAAEHKATEELITASGIPATFLRNGWYTENHQQDFAAARDQGVIA NSVGDGRLATAPRKDFAEAGAVVLTSTGHEGQAYELSGDTAWSYEEFAGVAGQVLDQPVRYQALTPEQEHDQMLAFGLDE GTAGFMVALHGNMRDGALAPTPGDLARLIGHPTEPLATTLRTWV >Mature_283_residues TIAIVGATGQLGGLTIDALLGRGIPAGDILALGRNADRLSALADRGVRTAALDLDDVEGTTAALADVDRLLLISVGAPGQ ALGPRRNAIEAARRAGVGHMIYTSALQAPTTILGLAAEHKATEELITASGIPATFLRNGWYTENHQQDFAAARDQGVIAN SVGDGRLATAPRKDFAEAGAVVLTSTGHEGQAYELSGDTAWSYEEFAGVAGQVLDQPVRYQALTPEQEHDQMLAFGLDEG TAGFMVALHGNMRDGALAPTPGDLARLIGHPTEPLATTLRTWV
Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1790656, Length=278, Percent_Identity=41.3669064748201, Blast_Score=179, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: =1.6.5.2 [H]
Molecular weight: Translated: 29567; Mature: 29435
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAIVGATGQLGGLTIDALLGRGIPAGDILALGRNADRLSALADRGVRTAALDLDDVEG CEEEEEECCCCCCCEEHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEECCCCCCC TTAALADVDRLLLISVGAPGQALGPRRNAIEAARRAGVGHMIYTSALQAPTTILGLAAEH CHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH KATEELITASGIPATFLRNGWYTENHQQDFAAARDQGVIANSVGDGRLATAPRKDFAEAG HHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHCC AVVLTSTGHEGQAYELSGDTAWSYEEFAGVAGQVLDQPVRYQALTPEQEHDQMLAFGLDE EEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCEEEEECCC GTAGFMVALHGNMRDGALAPTPGDLARLIGHPTEPLATTLRTWV CCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure TIAIVGATGQLGGLTIDALLGRGIPAGDILALGRNADRLSALADRGVRTAALDLDDVEG EEEEEECCCCCCCEEHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEECCCCCCC TTAALADVDRLLLISVGAPGQALGPRRNAIEAARRAGVGHMIYTSALQAPTTILGLAAEH CHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH KATEELITASGIPATFLRNGWYTENHQQDFAAARDQGVIANSVGDGRLATAPRKDFAEAG HHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHCC AVVLTSTGHEGQAYELSGDTAWSYEEFAGVAGQVLDQPVRYQALTPEQEHDQMLAFGLDE EEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCEEEEECCC GTAGFMVALHGNMRDGALAPTPGDLARLIGHPTEPLATTLRTWV CCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]