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The map label for this gene is yxaD [H]

Identifier: 119716401

GI number: 119716401

Start: 2322463

End: 2322861

Strand: Direct

Name: yxaD [H]

Synonym: Noca_2171

Alternate gene names: 119716401

Gene position: 2322463-2322861 (Clockwise)

Preceding gene: 119716398

Following gene: 119716404

Centisome position: 46.58

GC content: 65.41

Gene sequence:

>399_bases
GTGGTTCGGCGTGCCCAGAAGGTCCAGCTGGGCGGAGGGCCCGCGCTCTCCATCGACCGTGCTGGGTACTCGGTGCTCGC
GCGGCTGCACGAGGTCGGCCCCCAACGTCCGAGTGCCTTGGCCGACCAGTTTCACCTCGACGCGTCCACCATCACTCGCC
AGGTCCGGATCCTGCAACGGGAGGGACTGGTTGAGCGTGCATCGTTCGACGGAGACGGCCGCGTGGCCATCTACGGCCTG
ACCGATCAAGGTGTCGAGGTCATCAACAGCCTGCTCGCCAGACGACGTCAGCTCCTCGCCGACCTCCTTTCGAGTTGGAC
AGACTCCGACCGGACGGCCTTCGCGGACCTGCTGAAAAGCTTCAACGGCAGGCTCGATGAGCGCTTCGGATCAGACTAG

Upstream 100 bases:

>100_bases
GTCAGTGAGCAGCAACACGGTCGCGGGTCAGGATGGAGGCAAGGCTGCACGGCCCGGAAGCCGCGACGCGGTTGATGACA
TCGAACGGGAACTCACGCTG

Downstream 100 bases:

>100_bases
GCAATCTGTCCCGGGTGAGGCCCCACGTCGGCATTCCGCATCTTCGGGCCTCTCATTGCATCCGCACGAACATGCCATCG
CCCGGGTATCAGTCCCTGCT

Product: regulatory protein MarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVRRAQKVQLGGGPALSIDRAGYSVLARLHEVGPQRPSALADQFHLDASTITRQVRILQREGLVERASFDGDGRVAIYGL
TDQGVEVINSLLARRRQLLADLLSSWTDSDRTAFADLLKSFNGRLDERFGSD

Sequences:

>Translated_132_residues
MVRRAQKVQLGGGPALSIDRAGYSVLARLHEVGPQRPSALADQFHLDASTITRQVRILQREGLVERASFDGDGRVAIYGL
TDQGVEVINSLLARRRQLLADLLSSWTDSDRTAFADLLKSFNGRLDERFGSD
>Mature_132_residues
MVRRAQKVQLGGGPALSIDRAGYSVLARLHEVGPQRPSALADQFHLDASTITRQVRILQREGLVERASFDGDGRVAIYGL
TDQGVEVINSLLARRRQLLADLLSSWTDSDRTAFADLLKSFNGRLDERFGSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 14566; Mature: 14566

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRAQKVQLGGGPALSIDRAGYSVLARLHEVGPQRPSALADQFHLDASTITRQVRILQR
CCCCCCEEECCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
EGLVERASFDGDGRVAIYGLTDQGVEVINSLLARRRQLLADLLSSWTDSDRTAFADLLKS
HCCHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FNGRLDERFGSD
HCCHHHHHCCCC
>Mature Secondary Structure
MVRRAQKVQLGGGPALSIDRAGYSVLARLHEVGPQRPSALADQFHLDASTITRQVRILQR
CCCCCCEEECCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
EGLVERASFDGDGRVAIYGLTDQGVEVINSLLARRRQLLADLLSSWTDSDRTAFADLLKS
HCCHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FNGRLDERFGSD
HCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]