| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716354
Identifier: 119716354
GI number: 119716354
Start: 2269698
End: 2270432
Strand: Direct
Name: 119716354
Synonym: Noca_2123
Alternate gene names: NA
Gene position: 2269698-2270432 (Clockwise)
Preceding gene: 119716353
Following gene: 119716356
Centisome position: 45.52
GC content: 68.71
Gene sequence:
>735_bases GTGCTCGTCGCGCTGGCCGGGGTCGGCTGGTGGTGGACGGCCGACGAGATGCGCGGCATGGATCAAGGGCCCTGGACCGC CCTGGGTACCTTCGGCTGGTTCATGGGCGTATGGGTGGTGATGATGGCGGCCATGATGTTCCCGTCGGTCGCCCCGACCG TCGCCCTGTACGCACGGATGAGCAGGTCGTCCACCCGACCCGTCGTGTTCACCACCGGCTACCTGGCCGCGTGGGCGGGC GCGGGAGTGATCGCATTCGTGGGTGGGTTGGCCACGGCGAACGCGGTGCATGGTGCGCTCGGATGGGATTCCGCAGGCCA GAGGATTGCCGGGGGCACCTTGCTGGTTGCTGCCGCCTACGAGCTCACGCCTCTCAAGGACGTCTGCCTGGGCAAGTGCC GCAGCCCGCTCGGGACACTGCTCGGGTCCTGGCGCGACGGGTGGGCCGGTGCCTTCCGGATGGGGTTGGGCAACGGCGCC TGGTGCGTCGGTTGCTGCTGGGCGCTGATGGTTTCGCTGTTCGCCCTCGGCGTGATGAGCGTGACATGGATGGCAGTGGT CGCCGGTCTGATCGCGGTCGAGAAGCTGATGCCGTGGCGTCGCGTGGCGACGTACGCGACGACGACTGTGCTGATCGTGC TCGGCCTCTTCATGACGTTCGCCCCTGACGCGCTGCCCGGCCTCACCGTCCCGGGCCACAGCCCCATGCCTTCGATGTCG TCCATGCGCTCCTGA
Upstream 100 bases:
>100_bases ACCTGGGCCGCTTGAGCCCATGACCGAGGCAGAGTCGATCACCGGCTCGGGCCTTGGACCGGCATACGCTGCGTCGCGTG CCCATGTCGGGATCGTTGCT
Downstream 100 bases:
>100_bases AGCGACCCCCCGCGGCGGATTGCCGCACCTGAAGCGACCTTCTGTACCACGCTTGTAACGAGCGCGGCTCCCGATCGTCC GCCGCGACAGAGGATCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MLVALAGVGWWWTADEMRGMDQGPWTALGTFGWFMGVWVVMMAAMMFPSVAPTVALYARMSRSSTRPVVFTTGYLAAWAG AGVIAFVGGLATANAVHGALGWDSAGQRIAGGTLLVAAAYELTPLKDVCLGKCRSPLGTLLGSWRDGWAGAFRMGLGNGA WCVGCCWALMVSLFALGVMSVTWMAVVAGLIAVEKLMPWRRVATYATTTVLIVLGLFMTFAPDALPGLTVPGHSPMPSMS SMRS
Sequences:
>Translated_244_residues MLVALAGVGWWWTADEMRGMDQGPWTALGTFGWFMGVWVVMMAAMMFPSVAPTVALYARMSRSSTRPVVFTTGYLAAWAG AGVIAFVGGLATANAVHGALGWDSAGQRIAGGTLLVAAAYELTPLKDVCLGKCRSPLGTLLGSWRDGWAGAFRMGLGNGA WCVGCCWALMVSLFALGVMSVTWMAVVAGLIAVEKLMPWRRVATYATTTVLIVLGLFMTFAPDALPGLTVPGHSPMPSMS SMRS >Mature_244_residues MLVALAGVGWWWTADEMRGMDQGPWTALGTFGWFMGVWVVMMAAMMFPSVAPTVALYARMSRSSTRPVVFTTGYLAAWAG AGVIAFVGGLATANAVHGALGWDSAGQRIAGGTLLVAAAYELTPLKDVCLGKCRSPLGTLLGSWRDGWAGAFRMGLGNGA WCVGCCWALMVSLFALGVMSVTWMAVVAGLIAVEKLMPWRRVATYATTTVLIVLGLFMTFAPDALPGLTVPGHSPMPSMS SMRS
Specific function: Unknown
COG id: COG5486
COG function: function code S; Predicted metal-binding integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25753; Mature: 25753
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVALAGVGWWWTADEMRGMDQGPWTALGTFGWFMGVWVVMMAAMMFPSVAPTVALYARM CEEEEECCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SRSSTRPVVFTTGYLAAWAGAGVIAFVGGLATANAVHGALGWDSAGQRIAGGTLLVAAAY HCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHH ELTPLKDVCLGKCRSPLGTLLGSWRDGWAGAFRMGLGNGAWCVGCCWALMVSLFALGVMS HCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VTWMAVVAGLIAVEKLMPWRRVATYATTTVLIVLGLFMTFAPDALPGLTVPGHSPMPSMS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH SMRS HCCC >Mature Secondary Structure MLVALAGVGWWWTADEMRGMDQGPWTALGTFGWFMGVWVVMMAAMMFPSVAPTVALYARM CEEEEECCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SRSSTRPVVFTTGYLAAWAGAGVIAFVGGLATANAVHGALGWDSAGQRIAGGTLLVAAAY HCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHH ELTPLKDVCLGKCRSPLGTLLGSWRDGWAGAFRMGLGNGAWCVGCCWALMVSLFALGVMS HCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VTWMAVVAGLIAVEKLMPWRRVATYATTTVLIVLGLFMTFAPDALPGLTVPGHSPMPSMS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH SMRS HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA