| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716313
Identifier: 119716313
GI number: 119716313
Start: 2225403
End: 2226137
Strand: Reverse
Name: 119716313
Synonym: Noca_2082
Alternate gene names: NA
Gene position: 2226137-2225403 (Counterclockwise)
Preceding gene: 119716314
Following gene: 119716311
Centisome position: 44.65
GC content: 71.56
Gene sequence:
>735_bases GTGACCGACGCCGACATCAACTTCTACTTCGACCCCGTCTGCCCGTTCGCCTGGCTGACCAGCAAGTGGGTGCGGGTGGT CCAGTCCCAGCGGGCCTACTCCGTGGACTGGCGGCTCATCTCGCTGCGCCTGGTGAACGCCGACGTCGACTACGCCAGCC GGTTCCCTCCGGAGTACGAGGCCGGGCACACCGCCGGCCTCCGGCTGCTCCGGGTCGTGCATCGCGCCCGGTCCGAGCAC GGCCGGGAGGTGGTGGGCCCGCTCTACGCGGCGCTGGGAGCGCGCATCTTCGACTCTGCCCCCGCCGATCCTTCCCTGGG GAACACGGGCCCCGACCCCCGGGGCACGTCGTCGTTCCTCGCGCCGGTGCTGGCACACGTGGGGCTTCCCGACCACCTCG TGCAGGCGCTGGACGACGAGTCGCTCGACGCCGACATCCGTGCCGAGACCGACGAGGCCCTGTCCCTCACCGGGAAGGAC GTGGGGACGCCGATCATCCACTTCCAGCCACCCACCGGGGTCGCGTTCTTCGGGCCGGTCATCTCCCGGCTCCCCAGCGA AGAGGACGCCGTGCGGCTCTGGGACCACGTGGTCGGACTGGCCGGGTTCCCCGGGTTCGCCGAGCTCAAGCGCAGCCTTC GCGAGCTCCCCCAGCTGCGCGGTCTCGGTGTAGAGGAGGGCGAGGTGGGCGTCGAGCAGGACTGGCACGGCGGCAGCCGG CGGACGAACAGGTAG
Upstream 100 bases:
>100_bases CTCTGATGCGGTCCGCGCCCGTACCCGGGATGCCTGCCGCGGCCTCCTGGGTACGGGTAGGGCCGGAAGCCAAGGCCGAC ACAACCGAGAGGCAGCCGTC
Downstream 100 bases:
>100_bases GACCTGGACCGCGCATGCGCCTTCGCCGCGAGCAGCGGGTGCTGATCAGGGCCGACGCCTCAGCGCGGGGCCCGGCCGCC AGCGCTGAGCGGATGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTDADINFYFDPVCPFAWLTSKWVRVVQSQRAYSVDWRLISLRLVNADVDYASRFPPEYEAGHTAGLRLLRVVHRARSEH GREVVGPLYAALGARIFDSAPADPSLGNTGPDPRGTSSFLAPVLAHVGLPDHLVQALDDESLDADIRAETDEALSLTGKD VGTPIIHFQPPTGVAFFGPVISRLPSEEDAVRLWDHVVGLAGFPGFAELKRSLRELPQLRGLGVEEGEVGVEQDWHGGSR RTNR
Sequences:
>Translated_244_residues MTDADINFYFDPVCPFAWLTSKWVRVVQSQRAYSVDWRLISLRLVNADVDYASRFPPEYEAGHTAGLRLLRVVHRARSEH GREVVGPLYAALGARIFDSAPADPSLGNTGPDPRGTSSFLAPVLAHVGLPDHLVQALDDESLDADIRAETDEALSLTGKD VGTPIIHFQPPTGVAFFGPVISRLPSEEDAVRLWDHVVGLAGFPGFAELKRSLRELPQLRGLGVEEGEVGVEQDWHGGSR RTNR >Mature_243_residues TDADINFYFDPVCPFAWLTSKWVRVVQSQRAYSVDWRLISLRLVNADVDYASRFPPEYEAGHTAGLRLLRVVHRARSEHG REVVGPLYAALGARIFDSAPADPSLGNTGPDPRGTSSFLAPVLAHVGLPDHLVQALDDESLDADIRAETDEALSLTGKDV GTPIIHFQPPTGVAFFGPVISRLPSEEDAVRLWDHVVGLAGFPGFAELKRSLRELPQLRGLGVEEGEVGVEQDWHGGSRR TNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 26785; Mature: 26654
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDADINFYFDPVCPFAWLTSKWVRVVQSQRAYSVDWRLISLRLVNADVDYASRFPPEYE CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEECEEEEEEEEECCCCCHHHCCCCCCC AGHTAGLRLLRVVHRARSEHGREVVGPLYAALGARIFDSAPADPSLGNTGPDPRGTSSFL CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH APVLAHVGLPDHLVQALDDESLDADIRAETDEALSLTGKDVGTPIIHFQPPTGVAFFGPV HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCCEEEEECCCCHHHHHHH ISRLPSEEDAVRLWDHVVGLAGFPGFAELKRSLRELPQLRGLGVEEGEVGVEQDWHGGSR HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RTNR CCCC >Mature Secondary Structure TDADINFYFDPVCPFAWLTSKWVRVVQSQRAYSVDWRLISLRLVNADVDYASRFPPEYE CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEECEEEEEEEEECCCCCHHHCCCCCCC AGHTAGLRLLRVVHRARSEHGREVVGPLYAALGARIFDSAPADPSLGNTGPDPRGTSSFL CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH APVLAHVGLPDHLVQALDDESLDADIRAETDEALSLTGKDVGTPIIHFQPPTGVAFFGPV HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCCEEEEECCCCHHHHHHH ISRLPSEEDAVRLWDHVVGLAGFPGFAELKRSLRELPQLRGLGVEEGEVGVEQDWHGGSR HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RTNR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]