| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716312
Identifier: 119716312
GI number: 119716312
Start: 2224806
End: 2225213
Strand: Direct
Name: 119716312
Synonym: Noca_2081
Alternate gene names: NA
Gene position: 2224806-2225213 (Clockwise)
Preceding gene: 119716303
Following gene: 119716315
Centisome position: 44.62
GC content: 66.42
Gene sequence:
>408_bases ATGGACGTCATCTTCCTGGTGGGAAGGATCCTGTTCGGCGCGCTCTTCTTGATGTCGGCGATGGGCCACCTCACCCAGAC GCAGGCGATGGCCCAGTACGCGAGTTCCCGTGGCCTGCCCGTGGCGGCACCGGCCACCATGCTGAGCGGTGTGCTGATCG GGGTCGGGGGTCTCTCCGTGGTCCTGGGGGTGTGGGGCGACCTCGGCGCGATCCTGCTCGCTCTCTTCCTGGTGCCGACT GCGTTCCTGATGCATGCGTTCTGGAAGGAGACCGAGCCGACGTCCAAGCAGATGGAGATGGTCCAGTTCAACAAGGACCT GGCGCTGGCCGGTGGCGCGCTCGCGCTCCTCTGGGTCTTCTCCGCGGACGTGGGGCTGACCCTCACCGGTCCTCTGCTCG GGTTCTGA
Upstream 100 bases:
>100_bases TGCGCCGACGCTCCGATCGCGTTCGGGGGGTTGAGGGCAGATCTCGCTCTCGCGCGTCCGCAAGTGGGCGCGCACCCACA CCTAGGTCGGGAGGCATTCC
Downstream 100 bases:
>100_bases CCGGGCGGTGGATGCGTGTCCGACGGGATCCGGGATCGTGGACCCGGTGGAGCTCCTCGCGCCGGGATACACGGTCCGGC TGACGACCGCCAGCCATCCG
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Subfamily
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDVIFLVGRILFGALFLMSAMGHLTQTQAMAQYASSRGLPVAAPATMLSGVLIGVGGLSVVLGVWGDLGAILLALFLVPT AFLMHAFWKETEPTSKQMEMVQFNKDLALAGGALALLWVFSADVGLTLTGPLLGF
Sequences:
>Translated_135_residues MDVIFLVGRILFGALFLMSAMGHLTQTQAMAQYASSRGLPVAAPATMLSGVLIGVGGLSVVLGVWGDLGAILLALFLVPT AFLMHAFWKETEPTSKQMEMVQFNKDLALAGGALALLWVFSADVGLTLTGPLLGF >Mature_135_residues MDVIFLVGRILFGALFLMSAMGHLTQTQAMAQYASSRGLPVAAPATMLSGVLIGVGGLSVVLGVWGDLGAILLALFLVPT AFLMHAFWKETEPTSKQMEMVQFNKDLALAGGALALLWVFSADVGLTLTGPLLGF
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14184; Mature: 14184
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVIFLVGRILFGALFLMSAMGHLTQTQAMAQYASSRGLPVAAPATMLSGVLIGVGGLSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VLGVWGDLGAILLALFLVPTAFLMHAFWKETEPTSKQMEMVQFNKDLALAGGALALLWVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH SADVGLTLTGPLLGF HCCCCCEECCCCCCC >Mature Secondary Structure MDVIFLVGRILFGALFLMSAMGHLTQTQAMAQYASSRGLPVAAPATMLSGVLIGVGGLSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VLGVWGDLGAILLALFLVPTAFLMHAFWKETEPTSKQMEMVQFNKDLALAGGALALLWVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH SADVGLTLTGPLLGF HCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA