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The map label for this gene is yecD [C]

Identifier: 119716309

GI number: 119716309

Start: 2222271

End: 2222915

Strand: Reverse

Name: yecD [C]

Synonym: Noca_2078

Alternate gene names: 119716309

Gene position: 2222915-2222271 (Counterclockwise)

Preceding gene: 119716310

Following gene: 119716308

Centisome position: 44.58

GC content: 67.13

Gene sequence:

>645_bases
ATGGTGAACAGTGACACCGCCCTGGTCCTGACGGACCCGCAGAACGACTTCCTGAGCGAGCACGGAGTGGCCTGGGAGTT
GGTGGGGCAGAGCGTCCAGGAGAACGGCACGATCCCGAACATCGAGCGCCTCCTGGAGAGCGCGACGACGGCGGGCGTCC
CCGTCTTCGTCTCGCCCCACTACTACTACCCGTACGACGGCGCCTGGCAGTTCGGCGGGACGCTCGAGCAGAAGATGCAC
GAGATCGGGATGTTCGCCCGACGTGGCCCCCTCGACCTCGACGGCTTCGAGGGTTCGGGAGCGGACTGGCTGGACCAGTA
CAAGCCGTATCTCCAGGGCGACGGCACCGTCGTCACCAGCCCGCACAAGGTCTACGGCCCGCAGAACAACGACCTCGCAC
TGCAGTTGCGCAAGCGCGGCATCGGACGTGTGATCCTCGCGGGCATGTCAGCGAACCTCTGCGTCGAATCACACCTGCGC
GACCTGCTCGAGCGTGGTTTCGAGGTGACCGTCGTCGCCGATGCGACCGCCGCGGCCCGGCACCCCGAGCTCGGCGACGG
CTATGTGGCGGCGATGACCAACTTCCGCTACCTCGCCAGCGCGGTCGTCGACACGGTCCAAGCCTCCAAGGAGCTCGCCG
GCTGA

Upstream 100 bases:

>100_bases
GCCGGTCGAAGAGTGTCTGCGACCTGACAGTCCGTCGTCCGCCCGGCACCCCCGGCGTGTTCTCTCGGCAGTGAGGAACC
CCGACCCAAGGAGACACCTG

Downstream 100 bases:

>100_bases
CTCACCGCAGCCCGACACTCGAACCGTCGGGAAGCTCGCAGCCAGGTCACCGGGTTCCGGATGCAGGCGGTCCATCGGCC
ACCGCCCGGATCCGAGCTCG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase; Amidase Related Nicotinamidase; Amidase; Amidohydrolase; Amidase Related Nicotinamidases; Isochorismatase Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVNSDTALVLTDPQNDFLSEHGVAWELVGQSVQENGTIPNIERLLESATTAGVPVFVSPHYYYPYDGAWQFGGTLEQKMH
EIGMFARRGPLDLDGFEGSGADWLDQYKPYLQGDGTVVTSPHKVYGPQNNDLALQLRKRGIGRVILAGMSANLCVESHLR
DLLERGFEVTVVADATAAARHPELGDGYVAAMTNFRYLASAVVDTVQASKELAG

Sequences:

>Translated_214_residues
MVNSDTALVLTDPQNDFLSEHGVAWELVGQSVQENGTIPNIERLLESATTAGVPVFVSPHYYYPYDGAWQFGGTLEQKMH
EIGMFARRGPLDLDGFEGSGADWLDQYKPYLQGDGTVVTSPHKVYGPQNNDLALQLRKRGIGRVILAGMSANLCVESHLR
DLLERGFEVTVVADATAAARHPELGDGYVAAMTNFRYLASAVVDTVQASKELAG
>Mature_214_residues
MVNSDTALVLTDPQNDFLSEHGVAWELVGQSVQENGTIPNIERLLESATTAGVPVFVSPHYYYPYDGAWQFGGTLEQKMH
EIGMFARRGPLDLDGFEGSGADWLDQYKPYLQGDGTVVTSPHKVYGPQNNDLALQLRKRGIGRVILAGMSANLCVESHLR
DLLERGFEVTVVADATAAARHPELGDGYVAAMTNFRYLASAVVDTVQASKELAG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23272; Mature: 23272

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNSDTALVLTDPQNDFLSEHGVAWELVGQSVQENGTIPNIERLLESATTAGVPVFVSPH
CCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCC
YYYPYDGAWQFGGTLEQKMHEIGMFARRGPLDLDGFEGSGADWLDQYKPYLQGDGTVVTS
EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHCCCCCEEEEC
PHKVYGPQNNDLALQLRKRGIGRVILAGMSANLCVESHLRDLLERGFEVTVVADATAAAR
CHHEECCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHC
HPELGDGYVAAMTNFRYLASAVVDTVQASKELAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNSDTALVLTDPQNDFLSEHGVAWELVGQSVQENGTIPNIERLLESATTAGVPVFVSPH
CCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCC
YYYPYDGAWQFGGTLEQKMHEIGMFARRGPLDLDGFEGSGADWLDQYKPYLQGDGTVVTS
EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHCCCCCEEEEC
PHKVYGPQNNDLALQLRKRGIGRVILAGMSANLCVESHLRDLLERGFEVTVVADATAAAR
CHHEECCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHC
HPELGDGYVAAMTNFRYLASAVVDTVQASKELAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA