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The map label for this gene is 119716306

Identifier: 119716306

GI number: 119716306

Start: 2219880

End: 2220773

Strand: Reverse

Name: 119716306

Synonym: Noca_2075

Alternate gene names: NA

Gene position: 2220773-2219880 (Counterclockwise)

Preceding gene: 119716307

Following gene: 119716305

Centisome position: 44.54

GC content: 73.04

Gene sequence:

>894_bases
TTGGGACTCGCGCTCGGCGCGGGGATGCTCGCTGCGGTCAACCCGTGCGGGTTCGCCCTGCTCCCGGCCTACCTCTCGCT
GTTCGTGCTCGACCACCAGCAGCTGCCGCGCCGGACAGCCCTGCTGCGAGCGATGCGCGCGACCGCAGCGCTCACGATGG
GCTTCACCGTGGTCTTCGGCGTGTTCGGGATCGCGGTGGCTCCGGTGGCAGCCTCGGTCCAGTCCTATCTCCCCGGCTTC
ACGGTCGCGCTGGGCCTGCTGGTCGCCGTGGCCGGCCTCTGGGTCCTGCTGGGACGCCGGCTGCCGGCGATCCGTCTCAC
CCGCGGCGCGAACGCGCGGCCGGTGACGGCGAGCTGGCTGTCGATGACCGGGTTCGGTGCCAGCTACGCCGTCGCGTCGC
TGGGGTGCACGATCGCGCCGTTCCTGGCAGTGGTGGTCACCAGCTTCAGATCCGGGTCGCCGGCCCAGGGACTCGTCCTC
TTCGTGGCGTACGCCGCGGGCATGGGCTTCGTGGTGGGCGCGGCCGCGATGGCGACCGCGCTCGCCAGGGGCGGCTTGGT
CAACCGGGTGCGCAGCATCGGCGGGGTGCTTCCGCGCGTCGGAGGTCTCGTCCTCGTGCTGGCCGGAGGCTATGTCGCCT
GGTACGGCATCTGGGAGCTGCGCGTGCTCCACGCCGACGCGGGCCGCGACGCCGTCGTGGAGCAGGCGGCCTCGATCCAG
CGGTGGCTCGCCGACCGGGTCGAGGCCGTCGGGACCACCGGCTTCGCCCTCGTGCTCGGCGCGCTTCTGGTGGCGGCCCT
CCTGCCGCGGCGCCGCCGATCGCGACCACCGCCGGCCGTCGACGTACCCGACCCCGTCCTCCGACCGTCAGACACCATCA
AGGAGAACTCATGA

Upstream 100 bases:

>100_bases
ATCGCGGCGGACGGGGAGATCATCTCGGAGGGCTACCTGGACGACGGCGAGCTGAACGATCTCGTCGCGCAGCTGGCGGG
CTGAGGTGGACTCCGGGTCG

Downstream 100 bases:

>100_bases
GAATGCAGGCCGTCTTCAACGGAGCCGTCATCGCCGAGAGCGAGAGCACCGTGGTCCTGGAGGGCAACCACTACTTCCCC
GAGGAGTCGGTGCGACACGA

Product: cytochrome c biogenesis protein, transmembrane region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MGLALGAGMLAAVNPCGFALLPAYLSLFVLDHQQLPRRTALLRAMRATAALTMGFTVVFGVFGIAVAPVAASVQSYLPGF
TVALGLLVAVAGLWVLLGRRLPAIRLTRGANARPVTASWLSMTGFGASYAVASLGCTIAPFLAVVVTSFRSGSPAQGLVL
FVAYAAGMGFVVGAAAMATALARGGLVNRVRSIGGVLPRVGGLVLVLAGGYVAWYGIWELRVLHADAGRDAVVEQAASIQ
RWLADRVEAVGTTGFALVLGALLVAALLPRRRRSRPPPAVDVPDPVLRPSDTIKENS

Sequences:

>Translated_297_residues
MGLALGAGMLAAVNPCGFALLPAYLSLFVLDHQQLPRRTALLRAMRATAALTMGFTVVFGVFGIAVAPVAASVQSYLPGF
TVALGLLVAVAGLWVLLGRRLPAIRLTRGANARPVTASWLSMTGFGASYAVASLGCTIAPFLAVVVTSFRSGSPAQGLVL
FVAYAAGMGFVVGAAAMATALARGGLVNRVRSIGGVLPRVGGLVLVLAGGYVAWYGIWELRVLHADAGRDAVVEQAASIQ
RWLADRVEAVGTTGFALVLGALLVAALLPRRRRSRPPPAVDVPDPVLRPSDTIKENS
>Mature_296_residues
GLALGAGMLAAVNPCGFALLPAYLSLFVLDHQQLPRRTALLRAMRATAALTMGFTVVFGVFGIAVAPVAASVQSYLPGFT
VALGLLVAVAGLWVLLGRRLPAIRLTRGANARPVTASWLSMTGFGASYAVASLGCTIAPFLAVVVTSFRSGSPAQGLVLF
VAYAAGMGFVVGAAAMATALARGGLVNRVRSIGGVLPRVGGLVLVLAGGYVAWYGIWELRVLHADAGRDAVVEQAASIQR
WLADRVEAVGTTGFALVLGALLVAALLPRRRRSRPPPAVDVPDPVLRPSDTIKENS

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 30710; Mature: 30579

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLALGAGMLAAVNPCGFALLPAYLSLFVLDHQQLPRRTALLRAMRATAALTMGFTVVFG
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
VFGIAVAPVAASVQSYLPGFTVALGLLVAVAGLWVLLGRRLPAIRLTRGANARPVTASWL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH
SMTGFGASYAVASLGCTIAPFLAVVVTSFRSGSPAQGLVLFVAYAAGMGFVVGAAAMATA
HHHCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LARGGLVNRVRSIGGVLPRVGGLVLVLAGGYVAWYGIWELRVLHADAGRDAVVEQAASIQ
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
RWLADRVEAVGTTGFALVLGALLVAALLPRRRRSRPPPAVDVPDPVLRPSDTIKENS
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLALGAGMLAAVNPCGFALLPAYLSLFVLDHQQLPRRTALLRAMRATAALTMGFTVVFG
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
VFGIAVAPVAASVQSYLPGFTVALGLLVAVAGLWVLLGRRLPAIRLTRGANARPVTASWL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH
SMTGFGASYAVASLGCTIAPFLAVVVTSFRSGSPAQGLVLFVAYAAGMGFVVGAAAMATA
HHHCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LARGGLVNRVRSIGGVLPRVGGLVLVLAGGYVAWYGIWELRVLHADAGRDAVVEQAASIQ
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
RWLADRVEAVGTTGFALVLGALLVAALLPRRRRSRPPPAVDVPDPVLRPSDTIKENS
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1494353 [H]