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The map label for this gene is 119716245

Identifier: 119716245

GI number: 119716245

Start: 2155598

End: 2156731

Strand: Direct

Name: 119716245

Synonym: Noca_2013

Alternate gene names: NA

Gene position: 2155598-2156731 (Clockwise)

Preceding gene: 119716241

Following gene: 119716246

Centisome position: 43.23

GC content: 76.54

Gene sequence:

>1134_bases
ATGCCCGCGCTCGAGGACGTCGTCGACCTGCTGCACGGGTGGTACCCACCCCACACCGCCGACTCGTGGGACGCCGTCGG
GCTCGTGTACGGCGACCCCGCGGCGCCGGTGCGCAAGATCCTGTTCGCGGTCGACCCGGTGCTGCCGGTGGCCCAGGAGG
CAGCCGAGTGGGGCGCCGACCTGCTGGTCACCCACCACCCGCTGTTCCTCAAGGCCGTGCACGGATTCCCCGCCACGACC
CCCAAGGGCCGCACCCTGGCCGCCCTCGCCGGCGCCGGCTGCGCCCTGCTCGCGGCCCACACCAACGCCGACCAAGCCGT
CGGCGGCGTCTCCGAGGCGCTGGCCAGGACCCTGGGCCTGAGCGACCCCGAGCCGATCGTGCCGGCGTCCGCCGGCCTGC
TCGACAAGCTCACCGTGTACGTGCCCGCGGCCGACGCCGACCGGCTCCGCGAGGTGCTGGCGCAGGCGGGAGCGGGGCGG
ATCGGCGACTACGACCACGCCTCGTTCTCGAGCCCGGGCGAGGGCCGGTTCCGACCGCTGGAGGGCGCCCACCCCGCGAT
CGGGTCGGTCGGCGAGGTCGAGGTGGTCGACGAGGTCCGCGTCGAGGTCGTCGTCCCGCGGGACCGCCGAGCCGCGGTGG
TGCGCGCGCTGCTCACGGCCCACCCCTACGAGGAGCCGGCGTACGACGTCGTCGAGCTGGCCGACCCCGGCCTCGCGACG
ACCGGCACCGGGCGGATCGGCACCGTGCCGGAGACGACCCTGGAGGGGTTCGCCGCCCACGTGGCCGGCGCGCTGCCGGC
CACCGCCCAGGGAGTACGCGTCGCCGGCGACCCGCAGCGGCCGGTGCGCCGGGTGGCGCTGTGCGGCGGCGCAGGGGACT
TCCTGCTCGACGCGGTGGCGCGCACCGACGCCGACGTGTACGTGACCAGCGACCTGCGGCACCACCCTGCCAGCGAGTTC
GCCGAGCGCGGCGGGCCGGCGCTGGTCGACGTCGCCCACTGGGCGGCGGAGTGGACCTGGCTGCCGGTGGTGGCGGCGCG
GGTGGCCGAGGCGCTGGTGGCCGAGGGGACGGGCGATACGGTGGAGACCCGCGTCAGCACCATCCGGACCGACCCCTGGC
GGTTCCGGGTCTGA

Upstream 100 bases:

>100_bases
CGTGCGCCTGCGGCGGGACGGAGATGGCGTTGATCTTCACGACGGGCATGGGTCGAGGGTAGGCGGGCCCCGGACCCGCG
CGGGCCACTAGCCTGGCGCC

Downstream 100 bases:

>100_bases
CCTACCTGAACATCCGCATCCGAGGAGCCCACGCTGAAAGCCGACCCCTCCGCCCAACTGCAGCTGCTGGACGTGCAGGC
GCTCGACGCCCGGGCCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MPALEDVVDLLHGWYPPHTADSWDAVGLVYGDPAAPVRKILFAVDPVLPVAQEAAEWGADLLVTHHPLFLKAVHGFPATT
PKGRTLAALAGAGCALLAAHTNADQAVGGVSEALARTLGLSDPEPIVPASAGLLDKLTVYVPAADADRLREVLAQAGAGR
IGDYDHASFSSPGEGRFRPLEGAHPAIGSVGEVEVVDEVRVEVVVPRDRRAAVVRALLTAHPYEEPAYDVVELADPGLAT
TGTGRIGTVPETTLEGFAAHVAGALPATAQGVRVAGDPQRPVRRVALCGGAGDFLLDAVARTDADVYVTSDLRHHPASEF
AERGGPALVDVAHWAAEWTWLPVVAARVAEALVAEGTGDTVETRVSTIRTDPWRFRV

Sequences:

>Translated_377_residues
MPALEDVVDLLHGWYPPHTADSWDAVGLVYGDPAAPVRKILFAVDPVLPVAQEAAEWGADLLVTHHPLFLKAVHGFPATT
PKGRTLAALAGAGCALLAAHTNADQAVGGVSEALARTLGLSDPEPIVPASAGLLDKLTVYVPAADADRLREVLAQAGAGR
IGDYDHASFSSPGEGRFRPLEGAHPAIGSVGEVEVVDEVRVEVVVPRDRRAAVVRALLTAHPYEEPAYDVVELADPGLAT
TGTGRIGTVPETTLEGFAAHVAGALPATAQGVRVAGDPQRPVRRVALCGGAGDFLLDAVARTDADVYVTSDLRHHPASEF
AERGGPALVDVAHWAAEWTWLPVVAARVAEALVAEGTGDTVETRVSTIRTDPWRFRV
>Mature_376_residues
PALEDVVDLLHGWYPPHTADSWDAVGLVYGDPAAPVRKILFAVDPVLPVAQEAAEWGADLLVTHHPLFLKAVHGFPATTP
KGRTLAALAGAGCALLAAHTNADQAVGGVSEALARTLGLSDPEPIVPASAGLLDKLTVYVPAADADRLREVLAQAGAGRI
GDYDHASFSSPGEGRFRPLEGAHPAIGSVGEVEVVDEVRVEVVVPRDRRAAVVRALLTAHPYEEPAYDVVELADPGLATT
GTGRIGTVPETTLEGFAAHVAGALPATAQGVRVAGDPQRPVRRVALCGGAGDFLLDAVARTDADVYVTSDLRHHPASEFA
ERGGPALVDVAHWAAEWTWLPVVAARVAEALVAEGTGDTVETRVSTIRTDPWRFRV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 39473; Mature: 39342

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALEDVVDLLHGWYPPHTADSWDAVGLVYGDPAAPVRKILFAVDPVLPVAQEAAEWGAD
CCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
LLVTHHPLFLKAVHGFPATTPKGRTLAALAGAGCALLAAHTNADQAVGGVSEALARTLGL
EEEECCCHHHHHHCCCCCCCCCCCEEEHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCC
SDPEPIVPASAGLLDKLTVYVPAADADRLREVLAQAGAGRIGDYDHASFSSPGEGRFRPL
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EGAHPAIGSVGEVEVVDEVRVEVVVPRDRRAAVVRALLTAHPYEEPAYDVVELADPGLAT
CCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
TGTGRIGTVPETTLEGFAAHVAGALPATAQGVRVAGDPQRPVRRVALCGGAGDFLLDAVA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHH
RTDADVYVTSDLRHHPASEFAERGGPALVDVAHWAAEWTWLPVVAARVAEALVAEGTGDT
HCCCCEEEECCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VETRVSTIRTDPWRFRV
HHHHHHHHCCCCEEECC
>Mature Secondary Structure 
PALEDVVDLLHGWYPPHTADSWDAVGLVYGDPAAPVRKILFAVDPVLPVAQEAAEWGAD
CCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
LLVTHHPLFLKAVHGFPATTPKGRTLAALAGAGCALLAAHTNADQAVGGVSEALARTLGL
EEEECCCHHHHHHCCCCCCCCCCCEEEHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCC
SDPEPIVPASAGLLDKLTVYVPAADADRLREVLAQAGAGRIGDYDHASFSSPGEGRFRPL
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EGAHPAIGSVGEVEVVDEVRVEVVVPRDRRAAVVRALLTAHPYEEPAYDVVELADPGLAT
CCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
TGTGRIGTVPETTLEGFAAHVAGALPATAQGVRVAGDPQRPVRRVALCGGAGDFLLDAVA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHH
RTDADVYVTSDLRHHPASEFAERGGPALVDVAHWAAEWTWLPVVAARVAEALVAEGTGDT
HCCCCEEEECCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VETRVSTIRTDPWRFRV
HHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]