| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716217
Identifier: 119716217
GI number: 119716217
Start: 2122335
End: 2122820
Strand: Reverse
Name: 119716217
Synonym: Noca_1985
Alternate gene names: NA
Gene position: 2122820-2122335 (Counterclockwise)
Preceding gene: 119716218
Following gene: 119716210
Centisome position: 42.58
GC content: 72.22
Gene sequence:
>486_bases ATGACGCCCGTCACACGCCTGAGCTCCGTTCTCGCCGCGGCCGCGCTGGCCGCGGGCGTGCTCCCGGCCGTCCCTGCGCT GGCCGCGGAGCCCTCCGACCCCGTCTCGGGGCTGGTCGGCGGGCTGCTCGGCCAGCCGCAGCACCACGAGCGCCGCGACC GGGCCGACTACGGACATACCAGCGCGAAGGACGGGGTCCTGCGCCGCGGCTGCCACGACTACGCCTACCGCTACGTGATC ACCACGCCGAGCAACGACTGGACCCTCGAGACGTTCCTCGACGACCGCACCGGCGAGACCATCGCCTCCGGGACGTTCTT CTCCGACTCCGACCCGGCCCGCAACCGGACGCACTTCCGGTTCTGCCGCTACGGGACCTACGCCGGCAAGTTCAAGATCC GGGCCAAGGTGCACTGGTACGGCGGCGCCGGGGAGGACCACAAGGTCTGGCTGGCGCCCTCCTACTTCCGGCTGCGCCGA CCCTGA
Upstream 100 bases:
>100_bases TGCAGGCCGACGGCGTCCGCCGCGGCGCCCACGGGAACATCCCGCTCTGAGCGCCCGTACGCCGGCGTAACGGCTCGGCG GCTGGTGCGTTGGACCAGGC
Downstream 100 bases:
>100_bases CCTCAGACGACCTGGTGCAGCCAGCGCACCGGGGCCCCGTCGCCGGCGTGGCGGAAGGTCTCCAGCTCGTCGTCCCACGG CCGGCCGAGCAGCTTGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTPVTRLSSVLAAAALAAGVLPAVPALAAEPSDPVSGLVGGLLGQPQHHERRDRADYGHTSAKDGVLRRGCHDYAYRYVI TTPSNDWTLETFLDDRTGETIASGTFFSDSDPARNRTHFRFCRYGTYAGKFKIRAKVHWYGGAGEDHKVWLAPSYFRLRR P
Sequences:
>Translated_161_residues MTPVTRLSSVLAAAALAAGVLPAVPALAAEPSDPVSGLVGGLLGQPQHHERRDRADYGHTSAKDGVLRRGCHDYAYRYVI TTPSNDWTLETFLDDRTGETIASGTFFSDSDPARNRTHFRFCRYGTYAGKFKIRAKVHWYGGAGEDHKVWLAPSYFRLRR P >Mature_160_residues TPVTRLSSVLAAAALAAGVLPAVPALAAEPSDPVSGLVGGLLGQPQHHERRDRADYGHTSAKDGVLRRGCHDYAYRYVIT TPSNDWTLETFLDDRTGETIASGTFFSDSDPARNRTHFRFCRYGTYAGKFKIRAKVHWYGGAGEDHKVWLAPSYFRLRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17809; Mature: 17678
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVTRLSSVLAAAALAAGVLPAVPALAAEPSDPVSGLVGGLLGQPQHHERRDRADYGHT CCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCC SAKDGVLRRGCHDYAYRYVITTPSNDWTLETFLDDRTGETIASGTFFSDSDPARNRTHFR CCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEE FCRYGTYAGKFKIRAKVHWYGGAGEDHKVWLAPSYFRLRRP EEECCCCCCEEEEEEEEEEECCCCCCCEEEECCCCEEECCC >Mature Secondary Structure TPVTRLSSVLAAAALAAGVLPAVPALAAEPSDPVSGLVGGLLGQPQHHERRDRADYGHT CHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCC SAKDGVLRRGCHDYAYRYVITTPSNDWTLETFLDDRTGETIASGTFFSDSDPARNRTHFR CCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEE FCRYGTYAGKFKIRAKVHWYGGAGEDHKVWLAPSYFRLRRP EEECCCCCCEEEEEEEEEEECCCCCCCEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA