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The map label for this gene is mcp4 [H]

Identifier: 119716206

GI number: 119716206

Start: 2103474

End: 2105081

Strand: Reverse

Name: mcp4 [H]

Synonym: Noca_1974

Alternate gene names: 119716206

Gene position: 2105081-2103474 (Counterclockwise)

Preceding gene: 119716208

Following gene: 119716199

Centisome position: 42.22

GC content: 74.5

Gene sequence:

>1608_bases
ATGTCGCTCGCCCCGCCCCGCCTGCGCTCCCTCCCCCGATTCGTCGACCGGTCGATCCGCACCCGCGTGCTCAGCATCGT
CGGCGTCGTGGCCGCGGTCGTGCTCGCCCTCGGCGGGTACGCCGCCCACCTGATCGGGTCCGGCGCCGACCGTGGCGACG
TGCTGATGCGCGCGAACACGGCCACCGGGGCTGCGCTGCAGGCCGACATGATGCACGACGCGATCCGCAGCGACGTGCTC
CAGGTGCTCGGCAACCCCGACGACCCCGGCGCCCGCCTCTCGGCCGCCGCGGACCTGGAGCAGCACGCTGCGGCGCTGCA
GGACAGCCTCGACGAGGTGCGCGCCGCGCACCTGGGCGCGGACGTCGACCGGGCCCTCGCCGACGCCACCCCGATCGTCG
AGGTGTACCTGACGGCCGCGTCCTCCTGGATGACGACGGCGGAGGAGGACCCGGCCCGGGCGCGCGCGGCGTACCCCTCG
TTCCTGCAGGCCTTCCACACCCTCGAGGACACCCTGCCCGTGGTCACCGACGCGGTCGCGCAGCACGCGGTCGCCGCCCA
GCAGGGCGTCGAGGCGCAGCGGGGCGCCGTCACCCGGCTGCTGGTCGGTGCGTCGATCGGGCTGGTGGTCGTGCTCGCCC
TCGGGCTGCTGCTGACCCGCTCGCTCGTGCGCCCGCTCGACCGCGTGCGCGCCGTGCTCGAGGCGCTCGCCGAGGGTGAC
CTCACCCGCCACGCCGACGTCGACAGCCGCGACGAGCTCGGTCAGATGGCGGCCGCGCTCGAGCGGGCGACCGAGCGGCT
GCGGGCCACGGTCCGCGACATCGACCTGGCCGCCCAGGAGCTCGCCGACTCCTCGGCGGACCTGTCGCGGGTCTCGGCGC
AGATGAGCGACTCCGCCTCCGGGTCCGCGGCCAGCGCGCTGCAGGTGTCCACGGCGGCGGGCCAGGTGTCGGAGCACGTG
CACGCCGTCGCGGCGGGCACCGAGGAGATGTCCGCCTCGATCCGCGAGATCGCCCAGAGCACCAGCAGTGCCGCGGTGGT
CGCCACCGAGGCCGTGACGATCGCCCAGAGCACCACCGAGCTCGTCACGCAGCTCGGGGAGTCGTCCACCCAGATCGGCA
ACGTGGTCAAGCTGATCTCGAGCATCGCGGGCCAGACCAACCTGCTGGCGCTGAACGCGACCATCGAGGCCGCTCGCGCG
GGGGACGCCGGGAAGGGGTTCGCCGTGGTCGCCGGCGAGGTCAAGGAGCTCGCCGACCAGACCGGTTCGGCCACCGAGGA
CATCGAGCGCCAGGTCGCGGCGATCCAGCGCGACACCGTGCGGGCGGCCGACGCGATCGGCCGCATCTCCGCGGTGATCG
ACCAGGTCAACGACACCCAGGCGGCGATCGCCTCCGCGATCGAGCAGCAGACCGCCACGAGCGCCGAGATGAGCCACGGC
GTGGCCGAGGCCGCGACCGGCAGCGGGACGATCGCGCAGACCATCGACGAGGTGGCCCGACTGGCCGGTGACACCACCGA
CGCCTCGAGCGCGACGAGGGCGGCGGCGGACGGGCTCTCGGCGGTCTCCATGCGGATGCGGGGCCTGGTCGGCCAGTTCC
GCTACTGA

Upstream 100 bases:

>100_bases
ACGCCCCGGGCCGGGCCACCGGGCCAGATCGCACCCGCGGACAACTCAAGATCCGCGTCCTCCGGTCGATGAAGGTGCAA
CTCACCAGGAGGACCGGACC

Downstream 100 bases:

>100_bases
CCGCGGCCGCCACCGGCCGGGTCGATGCTCGTGTGGGGCGAGGGTCGGCCCGGCCGGGTCCTGGGGTCAGGCCCCGGCGA
CGGCCCTCGGCTCGAGCACC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSLAPPRLRSLPRFVDRSIRTRVLSIVGVVAAVVLALGGYAAHLIGSGADRGDVLMRANTATGAALQADMMHDAIRSDVL
QVLGNPDDPGARLSAAADLEQHAAALQDSLDEVRAAHLGADVDRALADATPIVEVYLTAASSWMTTAEEDPARARAAYPS
FLQAFHTLEDTLPVVTDAVAQHAVAAQQGVEAQRGAVTRLLVGASIGLVVVLALGLLLTRSLVRPLDRVRAVLEALAEGD
LTRHADVDSRDELGQMAAALERATERLRATVRDIDLAAQELADSSADLSRVSAQMSDSASGSAASALQVSTAAGQVSEHV
HAVAAGTEEMSASIREIAQSTSSAAVVATEAVTIAQSTTELVTQLGESSTQIGNVVKLISSIAGQTNLLALNATIEAARA
GDAGKGFAVVAGEVKELADQTGSATEDIERQVAAIQRDTVRAADAIGRISAVIDQVNDTQAAIASAIEQQTATSAEMSHG
VAEAATGSGTIAQTIDEVARLAGDTTDASSATRAAADGLSAVSMRMRGLVGQFRY

Sequences:

>Translated_535_residues
MSLAPPRLRSLPRFVDRSIRTRVLSIVGVVAAVVLALGGYAAHLIGSGADRGDVLMRANTATGAALQADMMHDAIRSDVL
QVLGNPDDPGARLSAAADLEQHAAALQDSLDEVRAAHLGADVDRALADATPIVEVYLTAASSWMTTAEEDPARARAAYPS
FLQAFHTLEDTLPVVTDAVAQHAVAAQQGVEAQRGAVTRLLVGASIGLVVVLALGLLLTRSLVRPLDRVRAVLEALAEGD
LTRHADVDSRDELGQMAAALERATERLRATVRDIDLAAQELADSSADLSRVSAQMSDSASGSAASALQVSTAAGQVSEHV
HAVAAGTEEMSASIREIAQSTSSAAVVATEAVTIAQSTTELVTQLGESSTQIGNVVKLISSIAGQTNLLALNATIEAARA
GDAGKGFAVVAGEVKELADQTGSATEDIERQVAAIQRDTVRAADAIGRISAVIDQVNDTQAAIASAIEQQTATSAEMSHG
VAEAATGSGTIAQTIDEVARLAGDTTDASSATRAAADGLSAVSMRMRGLVGQFRY
>Mature_534_residues
SLAPPRLRSLPRFVDRSIRTRVLSIVGVVAAVVLALGGYAAHLIGSGADRGDVLMRANTATGAALQADMMHDAIRSDVLQ
VLGNPDDPGARLSAAADLEQHAAALQDSLDEVRAAHLGADVDRALADATPIVEVYLTAASSWMTTAEEDPARARAAYPSF
LQAFHTLEDTLPVVTDAVAQHAVAAQQGVEAQRGAVTRLLVGASIGLVVVLALGLLLTRSLVRPLDRVRAVLEALAEGDL
TRHADVDSRDELGQMAAALERATERLRATVRDIDLAAQELADSSADLSRVSAQMSDSASGSAASALQVSTAAGQVSEHVH
AVAAGTEEMSASIREIAQSTSSAAVVATEAVTIAQSTTELVTQLGESSTQIGNVVKLISSIAGQTNLLALNATIEAARAG
DAGKGFAVVAGEVKELADQTGSATEDIERQVAAIQRDTVRAADAIGRISAVIDQVNDTQAAIASAIEQQTATSAEMSHGV
AEAATGSGTIAQTIDEVARLAGDTTDASSATRAAADGLSAVSMRMRGLVGQFRY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=343, Percent_Identity=28.5714285714286, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1788194, Length=297, Percent_Identity=32.3232323232323, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI2367378, Length=310, Percent_Identity=30, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1789453, Length=298, Percent_Identity=30.2013422818792, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1788195, Length=291, Percent_Identity=28.5223367697594, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 55009; Mature: 54878

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAPPRLRSLPRFVDRSIRTRVLSIVGVVAAVVLALGGYAAHLIGSGADRGDVLMRANT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
ATGAALQADMMHDAIRSDVLQVLGNPDDPGARLSAAADLEQHAAALQDSLDEVRAAHLGA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVDRALADATPIVEVYLTAASSWMTTAEEDPARARAAYPSFLQAFHTLEDTLPVVTDAVA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHAVAAQQGVEAQRGAVTRLLVGASIGLVVVLALGLLLTRSLVRPLDRVRAVLEALAEGD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTRHADVDSRDELGQMAAALERATERLRATVRDIDLAAQELADSSADLSRVSAQMSDSAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
GSAASALQVSTAAGQVSEHVHAVAAGTEEMSASIREIAQSTSSAAVVATEAVTIAQSTTE
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
LVTQLGESSTQIGNVVKLISSIAGQTNLLALNATIEAARAGDAGKGFAVVAGEVKELADQ
HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCEEEHHHHHHHHHH
TGSATEDIERQVAAIQRDTVRAADAIGRISAVIDQVNDTQAAIASAIEQQTATSAEMSHG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
VAEAATGSGTIAQTIDEVARLAGDTTDASSATRAAADGLSAVSMRMRGLVGQFRY
HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLAPPRLRSLPRFVDRSIRTRVLSIVGVVAAVVLALGGYAAHLIGSGADRGDVLMRANT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
ATGAALQADMMHDAIRSDVLQVLGNPDDPGARLSAAADLEQHAAALQDSLDEVRAAHLGA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVDRALADATPIVEVYLTAASSWMTTAEEDPARARAAYPSFLQAFHTLEDTLPVVTDAVA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHAVAAQQGVEAQRGAVTRLLVGASIGLVVVLALGLLLTRSLVRPLDRVRAVLEALAEGD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTRHADVDSRDELGQMAAALERATERLRATVRDIDLAAQELADSSADLSRVSAQMSDSAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
GSAASALQVSTAAGQVSEHVHAVAAGTEEMSASIREIAQSTSSAAVVATEAVTIAQSTTE
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
LVTQLGESSTQIGNVVKLISSIAGQTNLLALNATIEAARAGDAGKGFAVVAGEVKELADQ
HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCEEEHHHHHHHHHH
TGSATEDIERQVAAIQRDTVRAADAIGRISAVIDQVNDTQAAIASAIEQQTATSAEMSHG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
VAEAATGSGTIAQTIDEVARLAGDTTDASSATRAAADGLSAVSMRMRGLVGQFRY
HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]