Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716204

Identifier: 119716204

GI number: 119716204

Start: 2101396

End: 2102808

Strand: Direct

Name: 119716204

Synonym: Noca_1972

Alternate gene names: NA

Gene position: 2101396-2102808 (Clockwise)

Preceding gene: 119716203

Following gene: 119716205

Centisome position: 42.15

GC content: 65.04

Gene sequence:

>1413_bases
GTGCAGCGGCCCGGCGCGTATCCTCCCGTCGTGGCACGTTCTGACAAACGGCAGATCCCCACTCGAAGCGACACGGTTGC
CGATTTGCTGACCGCATCCGAAGGAGTTGTGGAGGCACCCGATCTTGAGCCCTGGGACTATGGCTGGAGCGTGGAGGACT
ACCGCAGATCTGCGACAGCCGCGCTCACAGGGCCCCGAGGCGCAGTTGCGCTAACGAATGATGCGCTTGGTGCATTCGAA
CGCGCGGTGGTGCGCATGCTTGCGGACGCCAGAGTTCAAGCGCGCTGGGACGAGGAGGAGTTCTGGCCTCTAGTCGGCTC
CCTAGTCGTGCGTGGGAGTTCGCTTCCTCAGGATCAACGCGAGACCTTCTTCGCCGCCCGCATCGAGTCGCTGCGCACCG
CGGGCCGGGCCTTCACAGCTCAACTCGTTGCCAATGTCTCCTGGCATGGGCCTCCGATGATCATCGGGAACGCCGTCATC
GGGTTGGCGAATACCGAACTACTCGACGCAGCGCGGTCAGTGGCGGGTACTCGGTGTGTTGTCACCGCAGATGAGGGCGA
ACGATGGCTCCGGGAGCGCGTTGGGGCGCGACCGCTCGCCACCAGCCAGCCACCGGTCGGACTGTGCTCATGGACAGTCG
GTCAGCGTGCGAAGGCTGTGGCGCAGACGGAGCGTTACCTGCGCGATGTGGTTGACCTGCCGCTCTTGCTGGAGCGCGAC
CTTCGCGGTCACGAGGTCTTTCGTCGGGGTGAGGTGAACCGGCCGGGCGAGCGCGGCCTCACGCTCGACCGCGCAGCGGT
TGAGGCGATCCTCAGGGCGGCCGACGCGTCGGTCGAACTGGCGTCCTTCCCCCTCACGGTCACCGACGCCCTTGGGCCAT
ATCTTCCCGTGCAGTGGTATAACGCTGAACCTCTTCCGCTGGGCGATCTGCTTCAGCAGACCTACCTAAGGGATGCTGTG
GCAGCCACGCTGGAAGACGACGACCCGGTCGCACGGCGGCTTCGTGTCGCGGCACGCTGGTTCGCCGAGGCGCACTACAC
GACCGCCTCCGACGACGCGGCGTTGGCGCTCGGCGTCAGCTTGGACGCCTTGTTGACTGGCAAACGGGCGCTACCCGGTG
CAGTCATGGCCGACCGCTACGCCCTCCTGTTCGCGGACCCGCTTTCACGTCGACAACGGCGTAGGGAATATCAAAGATTC
TTCGGAGTGCGCAGCTCGGTGGCCCACGGCGGTCACAGCGGAGAGTTGCGGCGCATGGACCTTCTGGCTGAGTTCTTCGA
GCTCGTTCATCAAGCGGCCTGGCGTCTGCTGGAAGTCAAGCGCGTATTCTCCCCGTCGACCGAGGATGCCGTCGACGAGC
TGTTCGACGATCTCCGATTGGGGGTTGTCCAGTGGCCGTCGGAAGGCGATTGA

Upstream 100 bases:

>100_bases
GGACACCGCTGACCTGCGGAAATGTCGCTAGGAAGGGATAGGTAATCCCCTTCCAAGCCGACATGAATGGCGGGCGAACG
CGACAACCGAAGTCACGTCA

Downstream 100 bases:

>100_bases
CCGTGGAGGGCAAACGGTGCGCCGGGCTCGGCTGAAGCGGGTCGTGCCACCGCGACGTCGATCGCCTCTGGCGTGCTCCA
CGGACGAAGGAGCCCCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQRPGAYPPVVARSDKRQIPTRSDTVADLLTASEGVVEAPDLEPWDYGWSVEDYRRSATAALTGPRGAVALTNDALGAFE
RAVVRMLADARVQARWDEEEFWPLVGSLVVRGSSLPQDQRETFFAARIESLRTAGRAFTAQLVANVSWHGPPMIIGNAVI
GLANTELLDAARSVAGTRCVVTADEGERWLRERVGARPLATSQPPVGLCSWTVGQRAKAVAQTERYLRDVVDLPLLLERD
LRGHEVFRRGEVNRPGERGLTLDRAAVEAILRAADASVELASFPLTVTDALGPYLPVQWYNAEPLPLGDLLQQTYLRDAV
AATLEDDDPVARRLRVAARWFAEAHYTTASDDAALALGVSLDALLTGKRALPGAVMADRYALLFADPLSRRQRRREYQRF
FGVRSSVAHGGHSGELRRMDLLAEFFELVHQAAWRLLEVKRVFSPSTEDAVDELFDDLRLGVVQWPSEGD

Sequences:

>Translated_470_residues
MQRPGAYPPVVARSDKRQIPTRSDTVADLLTASEGVVEAPDLEPWDYGWSVEDYRRSATAALTGPRGAVALTNDALGAFE
RAVVRMLADARVQARWDEEEFWPLVGSLVVRGSSLPQDQRETFFAARIESLRTAGRAFTAQLVANVSWHGPPMIIGNAVI
GLANTELLDAARSVAGTRCVVTADEGERWLRERVGARPLATSQPPVGLCSWTVGQRAKAVAQTERYLRDVVDLPLLLERD
LRGHEVFRRGEVNRPGERGLTLDRAAVEAILRAADASVELASFPLTVTDALGPYLPVQWYNAEPLPLGDLLQQTYLRDAV
AATLEDDDPVARRLRVAARWFAEAHYTTASDDAALALGVSLDALLTGKRALPGAVMADRYALLFADPLSRRQRRREYQRF
FGVRSSVAHGGHSGELRRMDLLAEFFELVHQAAWRLLEVKRVFSPSTEDAVDELFDDLRLGVVQWPSEGD
>Mature_470_residues
MQRPGAYPPVVARSDKRQIPTRSDTVADLLTASEGVVEAPDLEPWDYGWSVEDYRRSATAALTGPRGAVALTNDALGAFE
RAVVRMLADARVQARWDEEEFWPLVGSLVVRGSSLPQDQRETFFAARIESLRTAGRAFTAQLVANVSWHGPPMIIGNAVI
GLANTELLDAARSVAGTRCVVTADEGERWLRERVGARPLATSQPPVGLCSWTVGQRAKAVAQTERYLRDVVDLPLLLERD
LRGHEVFRRGEVNRPGERGLTLDRAAVEAILRAADASVELASFPLTVTDALGPYLPVQWYNAEPLPLGDLLQQTYLRDAV
AATLEDDDPVARRLRVAARWFAEAHYTTASDDAALALGVSLDALLTGKRALPGAVMADRYALLFADPLSRRQRRREYQRF
FGVRSSVAHGGHSGELRRMDLLAEFFELVHQAAWRLLEVKRVFSPSTEDAVDELFDDLRLGVVQWPSEGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51870; Mature: 51870

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRPGAYPPVVARSDKRQIPTRSDTVADLLTASEGVVEAPDLEPWDYGWSVEDYRRSATA
CCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ALTGPRGAVALTNDALGAFERAVVRMLADARVQARWDEEEFWPLVGSLVVRGSSLPQDQR
EECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
ETFFAARIESLRTAGRAFTAQLVANVSWHGPPMIIGNAVIGLANTELLDAARSVAGTRCV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCHHHHHHHHHHCCCEEE
VTADEGERWLRERVGARPLATSQPPVGLCSWTVGQRAKAVAQTERYLRDVVDLPLLLERD
EECCCHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
LRGHEVFRRGEVNRPGERGLTLDRAAVEAILRAADASVELASFPLTVTDALGPYLPVQWY
CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEHHHCCCCCEEEEC
NAEPLPLGDLLQQTYLRDAVAATLEDDDPVARRLRVAARWFAEAHYTTASDDAALALGVS
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
LDALLTGKRALPGAVMADRYALLFADPLSRRQRRREYQRFFGVRSSVAHGGHSGELRRMD
HHHHHCCCCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LLAEFFELVHQAAWRLLEVKRVFSPSTEDAVDELFDDLRLGVVQWPSEGD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCCC
>Mature Secondary Structure
MQRPGAYPPVVARSDKRQIPTRSDTVADLLTASEGVVEAPDLEPWDYGWSVEDYRRSATA
CCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ALTGPRGAVALTNDALGAFERAVVRMLADARVQARWDEEEFWPLVGSLVVRGSSLPQDQR
EECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
ETFFAARIESLRTAGRAFTAQLVANVSWHGPPMIIGNAVIGLANTELLDAARSVAGTRCV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCHHHHHHHHHHCCCEEE
VTADEGERWLRERVGARPLATSQPPVGLCSWTVGQRAKAVAQTERYLRDVVDLPLLLERD
EECCCHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
LRGHEVFRRGEVNRPGERGLTLDRAAVEAILRAADASVELASFPLTVTDALGPYLPVQWY
CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEHHHCCCCCEEEEC
NAEPLPLGDLLQQTYLRDAVAATLEDDDPVARRLRVAARWFAEAHYTTASDDAALALGVS
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
LDALLTGKRALPGAVMADRYALLFADPLSRRQRRREYQRFFGVRSSVAHGGHSGELRRMD
HHHHHCCCCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LLAEFFELVHQAAWRLLEVKRVFSPSTEDAVDELFDDLRLGVVQWPSEGD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA