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The map label for this gene is 119716198

Identifier: 119716198

GI number: 119716198

Start: 2096111

End: 2097322

Strand: Reverse

Name: 119716198

Synonym: Noca_1966

Alternate gene names: NA

Gene position: 2097322-2096111 (Counterclockwise)

Preceding gene: 119716199

Following gene: 119716195

Centisome position: 42.07

GC content: 66.09

Gene sequence:

>1212_bases
ATGGCCACGAAGATGAAGGACGGCATCACGCAGCGCGGCCGCGGGTGGACCTACGTGGTTCGCGAGCGTGATCCCGAAAC
AGGAAGGTCTCGGCAGCGGTGGGTCTCGGGTTTCACCACGCGCGCAGAAGCCAAGGCTGCGCGGGACGCCGCTCGGCATG
CGCTACACAGCGGAACCTACGTCGCCCCGCAGGACATCACGGTCGCCGAGTGGCTCGACCGATGGATGGACGGGCACGAG
GTGACGCTGAAACCCTCCACCGCAAAGACCTACAGGGACAAGATCCGGCTCTACCTCAAGCCGAAGCTTGGATCCGCACG
CCTCCAGAGCCTCTCCCCGAGCGGCTTGACCGTGGTTTGGCGAGACCTCCAAGCGTCAGGCGGACGAAGTGGGGCACCGC
TCTCGCGTCGCACCGTCGAGTTCGCTCGCGCCGTCCTGCATGCAGCGATGCAGGACGCGGTGGTCGAGCGCATCATCCAG
GTGAACCCCGTCGACGGCTCAAAGATGGCCAAGCGCGACGGCAAGCCGAAGCACACGACCTGGACAGCGGCACAGGTGGC
CTCCTTCCTCACAGCGACCACAAGCGACCGGTGGCACCCGATGTGGGCTGTGTTCGCCTCCACAGGTATGCGGCGAGGCG
AGGTCGCCGGGCTGCGATGGAGCGATTCTCACGGCCCCATCGTCGATCTGGATGGCGGGACGATCCGGGTCGAGGTGTCG
ACGACGCAACTCGACAACCGAAGGGTGACGACAACGCCCAAGAATCATGAGCGCCGGACCATCGCCATCGACCCGGACCT
CGTCACCGTCCTTCGGACCTGGAAGGCAACACAGGCCGCCGAACGCCTGGCCTTCGGCCCAGGCTATGCCGACGCGGAGG
GCATCGTCTTCACATGGGAGGACGGGCGACCCGTCATGCCCGACTACATCAGCAAGACCTTTCTGACGGCCCAGACCAAG
CTCAAGGAACTAGCGGCAGGACCGGGTGACGATGCCCCGGCCACGATCGTGCCGTTGCCGAGACTCGTCCTGCACGGCCT
CCGTCACACCCACGCCACCATCCTGCTGCGCTCGGGCGTCCCGGTTCACGTCGTCGCTAGGCGGCTGGGCCACAAGGACC
CCTCGGTGACGCTGGATACCTACGCCGACGTCATCCCGGACGACGATTCGAGCGCCGTCGACGTGTTCTGGAACGCCGTA
TGGGGGGCATAG

Upstream 100 bases:

>100_bases
CCCGCACTGCACAGACGATCGGCATCAATCGCAGCACCGTGTATCGCTGGATCGAGGCGTGTCGTGAGCATGACCTCCTA
CCGAAGACCGAGGACGAATG

Downstream 100 bases:

>100_bases
GCGAGCACGTGTTCGAGGCTCCCGATAGCAGACCGTTAGCACGAGACGCAGGAAGGTATAGCCGGAAGGGATCCCACGCG
GCGCTGACCTGCGCAAACTC

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MATKMKDGITQRGRGWTYVVRERDPETGRSRQRWVSGFTTRAEAKAARDAARHALHSGTYVAPQDITVAEWLDRWMDGHE
VTLKPSTAKTYRDKIRLYLKPKLGSARLQSLSPSGLTVVWRDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQ
VNPVDGSKMAKRDGKPKHTTWTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGGTIRVEVS
TTQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAERLAFGPGYADAEGIVFTWEDGRPVMPDYISKTFLTAQTK
LKELAAGPGDDAPATIVPLPRLVLHGLRHTHATILLRSGVPVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVFWNAV
WGA

Sequences:

>Translated_403_residues
MATKMKDGITQRGRGWTYVVRERDPETGRSRQRWVSGFTTRAEAKAARDAARHALHSGTYVAPQDITVAEWLDRWMDGHE
VTLKPSTAKTYRDKIRLYLKPKLGSARLQSLSPSGLTVVWRDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQ
VNPVDGSKMAKRDGKPKHTTWTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGGTIRVEVS
TTQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAERLAFGPGYADAEGIVFTWEDGRPVMPDYISKTFLTAQTK
LKELAAGPGDDAPATIVPLPRLVLHGLRHTHATILLRSGVPVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVFWNAV
WGA
>Mature_402_residues
ATKMKDGITQRGRGWTYVVRERDPETGRSRQRWVSGFTTRAEAKAARDAARHALHSGTYVAPQDITVAEWLDRWMDGHEV
TLKPSTAKTYRDKIRLYLKPKLGSARLQSLSPSGLTVVWRDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQV
NPVDGSKMAKRDGKPKHTTWTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGGTIRVEVST
TQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAERLAFGPGYADAEGIVFTWEDGRPVMPDYISKTFLTAQTKL
KELAAGPGDDAPATIVPLPRLVLHGLRHTHATILLRSGVPVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVFWNAVW
GA

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44500; Mature: 44369

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKMKDGITQRGRGWTYVVRERDPETGRSRQRWVSGFTTRAEAKAARDAARHALHSGTY
CCCCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCE
VAPQDITVAEWLDRWMDGHEVTLKPSTAKTYRDKIRLYLKPKLGSARLQSLSPSGLTVVW
ECCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCEEEEEECCCCCHHHHCCCCCCCEEEE
RDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQVNPVDGSKMAKRDGKPKHTT
EEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCE
WTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGGTIRVEVS
EHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEECEEECCCCCCEEECCCCEEEEEEE
TTQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAERLAFGPGYADAEGIVFTWE
EEECCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
DGRPVMPDYISKTFLTAQTKLKELAAGPGDDAPATIVPLPRLVLHGLRHTHATILLRSGV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHCEEEEEECCC
PVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVFWNAVWGA
CHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ATKMKDGITQRGRGWTYVVRERDPETGRSRQRWVSGFTTRAEAKAARDAARHALHSGTY
CCCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCE
VAPQDITVAEWLDRWMDGHEVTLKPSTAKTYRDKIRLYLKPKLGSARLQSLSPSGLTVVW
ECCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCEEEEEECCCCCHHHHCCCCCCCEEEE
RDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQVNPVDGSKMAKRDGKPKHTT
EEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCE
WTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGGTIRVEVS
EHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEECEEECCCCCCEEECCCCEEEEEEE
TTQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAERLAFGPGYADAEGIVFTWE
EEECCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
DGRPVMPDYISKTFLTAQTKLKELAAGPGDDAPATIVPLPRLVLHGLRHTHATILLRSGV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHCEEEEEECCC
PVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVFWNAVWGA
CHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]