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The map label for this gene is dac [H]

Identifier: 119716195

GI number: 119716195

Start: 2093217

End: 2093954

Strand: Reverse

Name: dac [H]

Synonym: Noca_1963

Alternate gene names: 119716195

Gene position: 2093954-2093217 (Counterclockwise)

Preceding gene: 119716198

Following gene: 119716183

Centisome position: 42.0

GC content: 73.58

Gene sequence:

>738_bases
ATGGACGAGCAGCTCGAGTCGTTGCCGGAGGACTGGGAGCGCGCGCTCTGCGTGGTCGCCCACCCCGACGACATGGAGTT
CGGCGCGGCGGCCGCGGTCGCACGCTGGACCGCGCAGGGCAAGGACGTCACCTACTGCATGGTGACCAGCGGCGAGGCGG
GCATCGACGCGATGCCGCCCGAGGAGTGCCGGGTCGTGCGCGAGGCCGAGCAGGTCGAGTCGGCGCGGATCGTCGGCGTG
TCCGCGGTCGAGTTCCTCCACCAGCCCGACGGGGTGCTCGAGTACGGCGTCTCGCTGCGCCGCGAGATCGCCCACGTCGT
ACGCCGCTTCCGGCCCGACATCGTCGTGACCGGCAACTTCCGCGACACCTGGGGCGGGGTGAACCTCAACCAGGCCGACC
ACATCGCGACCGGCCGGGCGGTGGTCGACGCCGTGCGCGACGCCGGCAACCGGTGGGTGTTCCCCGAGCAGCTCGGCGAC
GGGCTCGAGCCGTGGGGCGGCGTCCGGGCCGTCTGGGCCTTCGGCTCCCCGAACGCCGCGCACGCGGTCGACACGAGCGA
CACGTTCGAGGCCGGGGTCGCCTCCCTGGAGGCGCACCGCGCCTACATCGACGGCCTCGGCTGGGAGCACTTCGACGCCC
GCGAGTTCCTCGAGGGCTTCGGCCGCCAGACCGGTCAGCGCCTCGGCGTCGCGCTCGCCGCGGCGTTCGAGGTGTTCCCG
ATGGGCTGGGGCGAGTAG

Upstream 100 bases:

>100_bases
CCCCCGCCCAGCGCTCGCTGGCCGGCGGCAGCCGCAGCGCGAGGTCGGCGTAGCGCGTCATGCCAGGCAGCGTGTCATGC
TCGCGAGCAGGAGGTCGCAC

Downstream 100 bases:

>100_bases
GCCGGGACAGCCTGGTCCTCCTCGGCCGACGGCGCGAACAGCCCGGCGAGCAGCGCGACGACCTCGTCCTCGCCTGCTGC
CGCGGCGTCGAGGAGCCGAC

Product: LmbE family protein

Products: NA

Alternate protein names: N-acetylchitobiose deacetylase; Tk-Dac [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDEQLESLPEDWERALCVVAHPDDMEFGAAAAVARWTAQGKDVTYCMVTSGEAGIDAMPPEECRVVREAEQVESARIVGV
SAVEFLHQPDGVLEYGVSLRREIAHVVRRFRPDIVVTGNFRDTWGGVNLNQADHIATGRAVVDAVRDAGNRWVFPEQLGD
GLEPWGGVRAVWAFGSPNAAHAVDTSDTFEAGVASLEAHRAYIDGLGWEHFDAREFLEGFGRQTGQRLGVALAAAFEVFP
MGWGE

Sequences:

>Translated_245_residues
MDEQLESLPEDWERALCVVAHPDDMEFGAAAAVARWTAQGKDVTYCMVTSGEAGIDAMPPEECRVVREAEQVESARIVGV
SAVEFLHQPDGVLEYGVSLRREIAHVVRRFRPDIVVTGNFRDTWGGVNLNQADHIATGRAVVDAVRDAGNRWVFPEQLGD
GLEPWGGVRAVWAFGSPNAAHAVDTSDTFEAGVASLEAHRAYIDGLGWEHFDAREFLEGFGRQTGQRLGVALAAAFEVFP
MGWGE
>Mature_245_residues
MDEQLESLPEDWERALCVVAHPDDMEFGAAAAVARWTAQGKDVTYCMVTSGEAGIDAMPPEECRVVREAEQVESARIVGV
SAVEFLHQPDGVLEYGVSLRREIAHVVRRFRPDIVVTGNFRDTWGGVNLNQADHIATGRAVVDAVRDAGNRWVFPEQLGD
GLEPWGGVRAVWAFGSPNAAHAVDTSDTFEAGVASLEAHRAYIDGLGWEHFDAREFLEGFGRQTGQRLGVALAAAFEVFP
MGWGE

Specific function: Deacylates the non-reducing end of diacetylchitobiose (GlcNAc2). Can also use N-acetylglucosamine (GlcNAc) and N- acetylchitotriose (GlcNAc3). Probably involved in chitin degradation [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 26752; Mature: 26752

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEQLESLPEDWERALCVVAHPDDMEFGAAAAVARWTAQGKDVTYCMVTSGEAGIDAMPP
CCCHHHHCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCH
EECRVVREAEQVESARIVGVSAVEFLHQPDGVLEYGVSLRREIAHVVRRFRPDIVVTGNF
HHHHHHHHHHHHHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
RDTWGGVNLNQADHIATGRAVVDAVRDAGNRWVFPEQLGDGLEPWGGVRAVWAFGSPNAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHCCCCCCCCCEEEEEECCCCCCC
HAVDTSDTFEAGVASLEAHRAYIDGLGWEHFDAREFLEGFGRQTGQRLGVALAAAFEVFP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MGWGE
CCCCC
>Mature Secondary Structure
MDEQLESLPEDWERALCVVAHPDDMEFGAAAAVARWTAQGKDVTYCMVTSGEAGIDAMPP
CCCHHHHCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCH
EECRVVREAEQVESARIVGVSAVEFLHQPDGVLEYGVSLRREIAHVVRRFRPDIVVTGNF
HHHHHHHHHHHHHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
RDTWGGVNLNQADHIATGRAVVDAVRDAGNRWVFPEQLGDGLEPWGGVRAVWAFGSPNAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHCCCCCCCCCEEEEEECCCCCCC
HAVDTSDTFEAGVASLEAHRAYIDGLGWEHFDAREFLEGFGRQTGQRLGVALAAAFEVFP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MGWGE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA