Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is yqjH [C]

Identifier: 119716150

GI number: 119716150

Start: 2045848

End: 2046621

Strand: Direct

Name: yqjH [C]

Synonym: Noca_1918

Alternate gene names: 119716150

Gene position: 2045848-2046621 (Clockwise)

Preceding gene: 119716149

Following gene: 119716151

Centisome position: 41.03

GC content: 73.0

Gene sequence:

>774_bases
GTGAGCACCAGGGCCCAGCAGTACGACGCGCGGGTGTTGCGCCGCGAGCAGCTCTCGGCGCACCTGGTCCGGCTCACCCT
CGGCGGGGCGGGACTCGCGGGCTTCGAGAGCACCGGCATCCCGGACGAATGGGTGGGGCTCGTGGTCCCCGGGCAGTTCC
AGAGCCGCTACTACACGGTCCGCTCGTGGGACGGCTCGGAGCTGGTGCTCGACGTCGTCGTCCACGAGAGTGGGCTGGTC
ACCGAGTGGGCCCAGCTGGACGTCGAGGGGCAGGCGGTCACGATCACCGAGGCGAAGGGCTCGTTCGCGATCCCGGCCGA
CGCGCAGTGGCTGATCCTGGTCGGCGACCTGACCGCGATGCCGGCGATGGCCCGGATCGCCGAGACCGTCCGCGTGCGCA
CCTCCGTGTATGCCGAGGTCCCGGACGACCTGCCCGACTACCTCCCCCCGGGGCCGCAGGTGACCTGGCTGGACCCGCCG
GGCGAGGGGGAGAGCCGGCTCGCCGAGGTGGTCGAGGGCATCGACTGGCCCGACGGTGCGGGCTACTTCTGGATGGCCGG
TGAGTCGGCGCAGATGCGGGCGATCCGCAAGCACCTGATGCGGGTGCGGCACCTGCCGAGCACGGCGTACGACGTCATGG
GCTACTGGCGCGGCGTCGCCCACCGCCAGCCGCGGGCCGTCGACCCCGGCCCGATCTACCGGGCGGGCAAGGCGGCCGGG
AAGTCCGACGAGCAGATCTGGGCCGAGTACGACGAGGCGGGGGAGCGCCGGTGA

Upstream 100 bases:

>100_bases
CAGCGGCTACCCGCTCCGCCACGCGTTCTGAGCTGCCCTCGCCCCCGAGCGAAGCTCGAGGGCGAGGACCCAGCCGCCGC
CCGACCGATACGGTTGCCCG

Downstream 100 bases:

>100_bases
CCAACCAGGGGAGCGGGCCGCAGCCCGCGCACCGCAGCGGGTTCGTGTCGTTCGTCGGCCGGCCCAACGCCGGCAAGTCG
ACGCTGACCAACGCACTGGT

Product: siderophore-interacting protein

Products: NA

Alternate protein names: Iron Utilization Protein; Iron-Chelator Utilization Protein; Siderophore Utilization Protein; Vulnibactin Utilization Protein VIUB; Mxcb Protein; Siderophore-Interacting Iron Utilization Protein; Fe-Utilization Protein; Siderophore Interacting Protein; Iron Transport/Utilisation Related Protein; Iron Utilisation Protein

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSTRAQQYDARVLRREQLSAHLVRLTLGGAGLAGFESTGIPDEWVGLVVPGQFQSRYYTVRSWDGSELVLDVVVHESGLV
TEWAQLDVEGQAVTITEAKGSFAIPADAQWLILVGDLTAMPAMARIAETVRVRTSVYAEVPDDLPDYLPPGPQVTWLDPP
GEGESRLAEVVEGIDWPDGAGYFWMAGESAQMRAIRKHLMRVRHLPSTAYDVMGYWRGVAHRQPRAVDPGPIYRAGKAAG
KSDEQIWAEYDEAGERR

Sequences:

>Translated_257_residues
MSTRAQQYDARVLRREQLSAHLVRLTLGGAGLAGFESTGIPDEWVGLVVPGQFQSRYYTVRSWDGSELVLDVVVHESGLV
TEWAQLDVEGQAVTITEAKGSFAIPADAQWLILVGDLTAMPAMARIAETVRVRTSVYAEVPDDLPDYLPPGPQVTWLDPP
GEGESRLAEVVEGIDWPDGAGYFWMAGESAQMRAIRKHLMRVRHLPSTAYDVMGYWRGVAHRQPRAVDPGPIYRAGKAAG
KSDEQIWAEYDEAGERR
>Mature_256_residues
STRAQQYDARVLRREQLSAHLVRLTLGGAGLAGFESTGIPDEWVGLVVPGQFQSRYYTVRSWDGSELVLDVVVHESGLVT
EWAQLDVEGQAVTITEAKGSFAIPADAQWLILVGDLTAMPAMARIAETVRVRTSVYAEVPDDLPDYLPPGPQVTWLDPPG
EGESRLAEVVEGIDWPDGAGYFWMAGESAQMRAIRKHLMRVRHLPSTAYDVMGYWRGVAHRQPRAVDPGPIYRAGKAAGK
SDEQIWAEYDEAGERR

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28405; Mature: 28274

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRAQQYDARVLRREQLSAHLVRLTLGGAGLAGFESTGIPDEWVGLVVPGQFQSRYYTV
CCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCCEEEEE
RSWDGSELVLDVVVHESGLVTEWAQLDVEGQAVTITEAKGSFAIPADAQWLILVGDLTAM
EECCCCCEEEEEEECCCCCEEHHHHEECCCCEEEEEECCCCEECCCCCEEEEEECCHHHH
PAMARIAETVRVRTSVYAEVPDDLPDYLPPGPQVTWLDPPGEGESRLAEVVEGIDWPDGA
HHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
GYFWMAGESAQMRAIRKHLMRVRHLPSTAYDVMGYWRGVAHRQPRAVDPGPIYRAGKAAG
CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KSDEQIWAEYDEAGERR
CCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
STRAQQYDARVLRREQLSAHLVRLTLGGAGLAGFESTGIPDEWVGLVVPGQFQSRYYTV
CCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCCEEEEE
RSWDGSELVLDVVVHESGLVTEWAQLDVEGQAVTITEAKGSFAIPADAQWLILVGDLTAM
EECCCCCEEEEEEECCCCCEEHHHHEECCCCEEEEEECCCCEECCCCCEEEEEECCHHHH
PAMARIAETVRVRTSVYAEVPDDLPDYLPPGPQVTWLDPPGEGESRLAEVVEGIDWPDGA
HHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
GYFWMAGESAQMRAIRKHLMRVRHLPSTAYDVMGYWRGVAHRQPRAVDPGPIYRAGKAAG
CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KSDEQIWAEYDEAGERR
CCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA