Click here to switch to the map view.

The map label for this gene is ycfF [C]

Identifier: 119716141

GI number: 119716141

Start: 2037929

End: 2038267

Strand: Direct

Name: ycfF [C]

Synonym: Noca_1909

Alternate gene names: 119716141

Gene position: 2037929-2038267 (Clockwise)

Preceding gene: 119716137

Following gene: 119716142

Centisome position: 40.87

GC content: 72.86

Gene sequence:

>339_bases
GTGGAGGACTGCCTGTTCTGCAAGATCGTCGCGGGAGACATCCCCGGCGAGGTCGTGCACACCACCGAGCGGACCGTCGC
GTTCCGCGACATCGACCCGAAGGCGCCGACGCACGTGCTGGTGGTGCCGCGGGACCACTACACGAACGCGGCGGAGCTGG
CGGCGGCCGACCCGCAGGCCACGGCCGAGCTGGTGACGACGGCCGCGGCCGTCGCGGCCGCGGAGGGGTACGCCGACTAC
CGCATCGTGTTCAACACCGGCGCCGAGGCCGGCCAGAGCGTGTTCCACACCCACCTGCACCTGCTCGCGGGCCGGCCGCT
GACCTGGCCGCCTGGATGA

Upstream 100 bases:

>100_bases
CGCCTCGTCCGCGGTCCAGACGGGCCGATCCATCACCGCACTCACGCTAGTGGCACGCTCGGGGCCAGCATTCGGTTTAC
CCTCGCCCCGAGGAGGATTC

Downstream 100 bases:

>100_bases
GCCCGACCCGGGGCCGCAGCCGGCCCGGGCTGCTCCTGGCCGTCCTCGCGCTGGTGCTGCCGCTGGCCGCGTGCGTCGCG
ACCGACGCCGACCGCCGGAC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MEDCLFCKIVAGDIPGEVVHTTERTVAFRDIDPKAPTHVLVVPRDHYTNAAELAAADPQATAELVTTAAAVAAAEGYADY
RIVFNTGAEAGQSVFHTHLHLLAGRPLTWPPG

Sequences:

>Translated_112_residues
MEDCLFCKIVAGDIPGEVVHTTERTVAFRDIDPKAPTHVLVVPRDHYTNAAELAAADPQATAELVTTAAAVAAAEGYADY
RIVFNTGAEAGQSVFHTHLHLLAGRPLTWPPG
>Mature_112_residues
MEDCLFCKIVAGDIPGEVVHTTERTVAFRDIDPKAPTHVLVVPRDHYTNAAELAAADPQATAELVTTAAAVAAAEGYADY
RIVFNTGAEAGQSVFHTHLHLLAGRPLTWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=111, Percent_Identity=40.5405405405405, Blast_Score=100, Evalue=2e-22,
Organism=Homo sapiens, GI14211923, Length=109, Percent_Identity=37.6146788990826, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=41.6666666666667, Blast_Score=94, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17506713, Length=112, Percent_Identity=41.0714285714286, Blast_Score=102, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6320078, Length=102, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574010, Length=112, Percent_Identity=41.9642857142857, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=41.9642857142857, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 11919; Mature: 11919

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDCLFCKIVAGDIPGEVVHTTERTVAFRDIDPKAPTHVLVVPRDHYTNAAELAAADPQA
CCCCEEEEEEECCCCCCEEECCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCH
TAELVTTAAAVAAAEGYADYRIVFNTGAEAGQSVFHTHLHLLAGRPLTWPPG
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEDCLFCKIVAGDIPGEVVHTTERTVAFRDIDPKAPTHVLVVPRDHYTNAAELAAADPQA
CCCCEEEEEEECCCCCCEEECCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCH
TAELVTTAAAVAAAEGYADYRIVFNTGAEAGQSVFHTHLHLLAGRPLTWPPG
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]