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The map label for this gene is aidB [H]

Identifier: 119716086

GI number: 119716086

Start: 1976994

End: 1978820

Strand: Direct

Name: aidB [H]

Synonym: Noca_1853

Alternate gene names: 119716086

Gene position: 1976994-1978820 (Clockwise)

Preceding gene: 119716085

Following gene: 119716087

Centisome position: 39.65

GC content: 71.21

Gene sequence:

>1827_bases
ATGAGCGTCCTGCAGGACAAGCTGCTGCCCACTCTGGACTACCTGCTGCACGAGTGGCTGGACCTGGGCGAGTTGCTCGA
GCGACCCCGCTTCGCCGACCACGACCGGGGCGGCATCGACGACCTCCTCCGGGCGGCGGCCGACATCGCCGCCGAGAAGT
ACGAGCCGGCCAACCGGATCATCGACGACCACGAGCCCGTCTTCGACGACGGCCGGGTCGTGCTGCCGAAGGAGACCGCC
GAGGCGTGGAACGCCTTCGTCGAGTTCGGCTTCCTGCAGGCCACGCACGACGTCGAGCACGGCGGCATGCAGCTGCCGCG
GACCGCGGACTTCGCCGCCAAGGTGATCTTCGGTGCCGCCTCGATCGGGATCAGCCCGGCCGTCCTCACCGAGGCGAACG
CGGCGCTGCTGCTCACGTACGGCAACCGGCTCCAGCGCGAGCTGTTCGCCGCCCGGGAGCTCACCGGGCGGTGGACGGGG
ACCATGTGCCTGTCCGAGTCCCAGGCCGGTTCCTCGCTCTCGGACATCACCACGCGCGCGGTCCCGGAGCCGGACGGCGC
CGACGACCCGCTCGGACCGCGCTACCGGCTGACCGGAAACAAGATGTGGATCAGCGCCGGTGAGCACGACCTGGCCGAGA
ACATCGTGCACCTGGTGCTTGCGAAGACCCCTGGGCCGGACGGTGCCATCGACCCGAGCACTAAGGGCATCTCGCTGTTC
GTGGTCCCGAAGTTCCTGGTGGACACGGCCGGTGCCCTGCTCGAGCGCAACGACGTCGTGCTCGTCGGGCTCAACCACAA
GCTGGGCTACCGCGGCACGCCCAACACCGCCCTCGCCTTCGGTGATGGCACCTGGGAACCGCAGGGCGGGAAGGGCGCGG
TCGGCTACCTGGTAGGCGAACCCGGGCAGGGCCTGAGGCAGATGTTCCACATGATGAACGCCGCCCGGATCGAGATCGGC
CTCGGTGCGGCAGCGCTCGGGTTCGCCGGCTACGCGGCCTCACTGGACTACGCGAAGAGCCGTCGGCAGGGTCGGCCGCT
CACCCGGTCCGGCAAGGATGCGACGCAGCCGCAGGTGCCGCTGGTCGAGCACGCGGACGTGAAGCGGATGCTGCTAGCGC
AGAAGGCGTACGCCGAGGGCGGCATCGCCCTGGGCCTGTACGCCGCCCGCCTCCTCGACGAGCAGGCCACCGGCACGCCG
GAGCAGGTCGCGGAGGCCGGCCGGCTCCTGGAGATCCTCACGCCGGTGGTGAAGAGCTGGCCCAGCGAGTGGTGCCTGGA
GGCGAACAGCCTGGCGATCCAGGTGCTCGGCGGCTCCGGCTACACCCGGGACTTCCCGGTCGAGCAGTACTGGCGCGACA
ACCGGCTCAACATGATCCACGAGGGCACCCACGGCATCCAGGCCCTCGACCTGCTCGGGCGGAAGATCCGGCTCGAGGGA
GGCGCCTACCTGGCGGCCCAGGGGGAGCGGGTGGCCGCGACCGTGACGAAGGCGCACACCGCCGGGTTCGAGGCGGAGTC
GGTCGCGCTCGCGCACGCTTGGCGCCGCGTCGTCGACGTCGCCGCGGAGGCCTGGTCGACCGGGGACCCCGAGGACGCGC
TGGCCAACGCGACGCCGTACCTCCAGGGGTTCGGGCACGTCGTGCTGGCCTGGGTGTGGCTCGACGTCGCGGCGGCGGCG
GCGAGCTGCAGCCACCCGGAGGCAGCCGGGAAGGTCGCCGCGATGCGGTACTTCTACGGCTACGAGCTGCCCAAGGTGGG
GGCCTGGTTCGACGTCGCCGCGCGGCGCGATCCTCTCTGCCGGGACCTTGATCCTGCCCTGCTCTGA

Upstream 100 bases:

>100_bases
CGCGCACCACCCCGGACCTGGACGCCCTCCTCGGTCACCCACCGCGACAGCTCGGCGAGTACGTCACCGAGCACGCCGCC
TACTGGAGAGAGAACGCTGC

Downstream 100 bases:

>100_bases
TGGCCGGACTCACCCAGGGGCGCGCGCTGGTGATGGCGGTCGGGTCCGCGGTGGGGTCCAGCAGCAGCGGGCCGCTCGCC
AAGGCGCTGCTGGACGGCGG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: 2-butenoyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MSVLQDKLLPTLDYLLHEWLDLGELLERPRFADHDRGGIDDLLRAAADIAAEKYEPANRIIDDHEPVFDDGRVVLPKETA
EAWNAFVEFGFLQATHDVEHGGMQLPRTADFAAKVIFGAASIGISPAVLTEANAALLLTYGNRLQRELFAARELTGRWTG
TMCLSESQAGSSLSDITTRAVPEPDGADDPLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKTPGPDGAIDPSTKGISLF
VVPKFLVDTAGALLERNDVVLVGLNHKLGYRGTPNTALAFGDGTWEPQGGKGAVGYLVGEPGQGLRQMFHMMNAARIEIG
LGAAALGFAGYAASLDYAKSRRQGRPLTRSGKDATQPQVPLVEHADVKRMLLAQKAYAEGGIALGLYAARLLDEQATGTP
EQVAEAGRLLEILTPVVKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLGRKIRLEG
GAYLAAQGERVAATVTKAHTAGFEAESVALAHAWRRVVDVAAEAWSTGDPEDALANATPYLQGFGHVVLAWVWLDVAAAA
ASCSHPEAAGKVAAMRYFYGYELPKVGAWFDVAARRDPLCRDLDPALL

Sequences:

>Translated_608_residues
MSVLQDKLLPTLDYLLHEWLDLGELLERPRFADHDRGGIDDLLRAAADIAAEKYEPANRIIDDHEPVFDDGRVVLPKETA
EAWNAFVEFGFLQATHDVEHGGMQLPRTADFAAKVIFGAASIGISPAVLTEANAALLLTYGNRLQRELFAARELTGRWTG
TMCLSESQAGSSLSDITTRAVPEPDGADDPLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKTPGPDGAIDPSTKGISLF
VVPKFLVDTAGALLERNDVVLVGLNHKLGYRGTPNTALAFGDGTWEPQGGKGAVGYLVGEPGQGLRQMFHMMNAARIEIG
LGAAALGFAGYAASLDYAKSRRQGRPLTRSGKDATQPQVPLVEHADVKRMLLAQKAYAEGGIALGLYAARLLDEQATGTP
EQVAEAGRLLEILTPVVKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLGRKIRLEG
GAYLAAQGERVAATVTKAHTAGFEAESVALAHAWRRVVDVAAEAWSTGDPEDALANATPYLQGFGHVVLAWVWLDVAAAA
ASCSHPEAAGKVAAMRYFYGYELPKVGAWFDVAARRDPLCRDLDPALL
>Mature_607_residues
SVLQDKLLPTLDYLLHEWLDLGELLERPRFADHDRGGIDDLLRAAADIAAEKYEPANRIIDDHEPVFDDGRVVLPKETAE
AWNAFVEFGFLQATHDVEHGGMQLPRTADFAAKVIFGAASIGISPAVLTEANAALLLTYGNRLQRELFAARELTGRWTGT
MCLSESQAGSSLSDITTRAVPEPDGADDPLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKTPGPDGAIDPSTKGISLFV
VPKFLVDTAGALLERNDVVLVGLNHKLGYRGTPNTALAFGDGTWEPQGGKGAVGYLVGEPGQGLRQMFHMMNAARIEIGL
GAAALGFAGYAASLDYAKSRRQGRPLTRSGKDATQPQVPLVEHADVKRMLLAQKAYAEGGIALGLYAARLLDEQATGTPE
QVAEAGRLLEILTPVVKSWPSEWCLEANSLAIQVLGGSGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLGRKIRLEGG
AYLAAQGERVAATVTKAHTAGFEAESVALAHAWRRVVDVAAEAWSTGDPEDALANATPYLQGFGHVVLAWVWLDVAAAAA
SCSHPEAAGKVAAMRYFYGYELPKVGAWFDVAARRDPLCRDLDPALL

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=30.2139037433155, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI4557235, Length=424, Percent_Identity=26.6509433962264, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI76496475, Length=424, Percent_Identity=26.6509433962264, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI21361497, Length=407, Percent_Identity=28.2555282555283, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4557233, Length=367, Percent_Identity=29.1553133514986, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI7656849, Length=398, Percent_Identity=26.8844221105528, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI226958414, Length=413, Percent_Identity=24.455205811138, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI226958412, Length=402, Percent_Identity=24.6268656716418, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI4557231, Length=333, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI187960098, Length=333, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87082384, Length=400, Percent_Identity=29, Blast_Score=105, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=370, Percent_Identity=26.4864864864865, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=405, Percent_Identity=27.1604938271605, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI86563383, Length=324, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI86563381, Length=324, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=402, Percent_Identity=25.6218905472637, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=389, Percent_Identity=21.8508997429306, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356377, Length=361, Percent_Identity=27.7008310249307, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24666513, Length=437, Percent_Identity=25.4004576659039, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21355753, Length=408, Percent_Identity=24.5098039215686, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24646207, Length=403, Percent_Identity=24.5657568238213, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: 1.3.99.2

Molecular weight: Translated: 65565; Mature: 65434

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLQDKLLPTLDYLLHEWLDLGELLERPRFADHDRGGIDDLLRAAADIAAEKYEPANRI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHC
IDDHEPVFDDGRVVLPKETAEAWNAFVEFGFLQATHDVEHGGMQLPRTADFAAKVIFGAA
CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
SIGISPAVLTEANAALLLTYGNRLQRELFAARELTGRWTGTMCLSESQAGSSLSDITTRA
HCCCCCHHEECCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHC
VPEPDGADDPLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKTPGPDGAIDPSTKGISLF
CCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEE
VVPKFLVDTAGALLERNDVVLVGLNHKLGYRGTPNTALAFGDGTWEPQGGKGAVGYLVGE
EEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
PGQGLRQMFHMMNAARIEIGLGAAALGFAGYAASLDYAKSRRQGRPLTRSGKDATQPQVP
CCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LVEHADVKRMLLAQKAYAEGGIALGLYAARLLDEQATGTPEQVAEAGRLLEILTPVVKSW
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PSEWCLEANSLAIQVLGGSGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLGRKIRLEG
CHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCCHHHHHHHCCCEEEECC
GAYLAAQGERVAATVTKAHTAGFEAESVALAHAWRRVVDVAAEAWSTGDPEDALANATPY
CEEEEECCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHH
LQGFGHVVLAWVWLDVAAAAASCSHPEAAGKVAAMRYFYGYELPKVGAWFDVAARRDPLC
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCC
RDLDPALL
CCCCCCCC
>Mature Secondary Structure 
SVLQDKLLPTLDYLLHEWLDLGELLERPRFADHDRGGIDDLLRAAADIAAEKYEPANRI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHC
IDDHEPVFDDGRVVLPKETAEAWNAFVEFGFLQATHDVEHGGMQLPRTADFAAKVIFGAA
CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
SIGISPAVLTEANAALLLTYGNRLQRELFAARELTGRWTGTMCLSESQAGSSLSDITTRA
HCCCCCHHEECCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHC
VPEPDGADDPLGPRYRLTGNKMWISAGEHDLAENIVHLVLAKTPGPDGAIDPSTKGISLF
CCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEE
VVPKFLVDTAGALLERNDVVLVGLNHKLGYRGTPNTALAFGDGTWEPQGGKGAVGYLVGE
EEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
PGQGLRQMFHMMNAARIEIGLGAAALGFAGYAASLDYAKSRRQGRPLTRSGKDATQPQVP
CCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LVEHADVKRMLLAQKAYAEGGIALGLYAARLLDEQATGTPEQVAEAGRLLEILTPVVKSW
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PSEWCLEANSLAIQVLGGSGYTRDFPVEQYWRDNRLNMIHEGTHGIQALDLLGRKIRLEG
CHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCCHHHHHHHCCCEEEECC
GAYLAAQGERVAATVTKAHTAGFEAESVALAHAWRRVVDVAAEAWSTGDPEDALANATPY
CEEEEECCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHH
LQGFGHVVLAWVWLDVAAAAASCSHPEAAGKVAAMRYFYGYELPKVGAWFDVAARRDPLC
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCC
RDLDPALL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: butanoyl-CoA; acceptor

Specific reaction: butanoyl-CoA + acceptor = 2-butenoyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]