| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is braE [H]
Identifier: 119716072
GI number: 119716072
Start: 1963098
End: 1964150
Strand: Direct
Name: braE [H]
Synonym: Noca_1839
Alternate gene names: 119716072
Gene position: 1963098-1964150 (Clockwise)
Preceding gene: 119716071
Following gene: 119716073
Centisome position: 39.37
GC content: 67.24
Gene sequence:
>1053_bases ATGTTGGGCTTCCTTCCTCGCCCGGTGATCCGGGCAGCGTTCGTCGGGCTCGTGGTGCTGGCCTTCCTGCTCCCGAACCT GACCCAGCCGTACACCATCCGCGTTGCCGCGACGATCCTGGTGTTCACCGTCTTCGCGACCGGGCTCAACCTGATCCTCG GGTTCGCCGGGCTGCTCAGCTTCGGACACGCCGCGATGTTCGGTGCCGGCGCCTACATCTCGGCGCGACTGCTCCTGGAC ACCGGAATGCCGCTGCTGGCGGTCATGGTGATCTCGGTCCTCGGCAGCGCCGTGTTCGGTCTGCTGGTCGGACTGACCTC GTGGCGGGTCGGCGGCGACTACCTCGCCCTGATCACCCTCGGGGTGGGGCAGATCTTCTACCTCTACCTCAACAACGCCA AGGAGGTGACCGGCGGCGCGACCGGCCTCCCCGGCATCCCGGCCGGCAACTTCTTCGGCTGGGACCTGGCGTTGATCGAG AACATCTACCTCTTCATCCTGGTGGTCACGATCGTGACCACCGCGTTCGCGTGGCTCATCGGCCGCTCCTTCCTCGGCCG TGCGTTCCTCGCGATCCGCGAGGACGAGGTGATTGCCCGGGCCCACGGCATCAACGTCCCGCTCACCAAGGTGATCGGGT TCGGCATCGGGAGCGGGATCGCCGGCCTGGCCGGCGTGCTGCAGGTGCTGCTGCTCGGCTTCGTCGGTCCGGCGACCTTC AACGTCGACCAGTCCATCCTCATCGTCGAGGTCGTCCTGATCGGCGGGATGGCGACGACGGCCGGCCCGCTGCTCGGTTC GCTCCTGGTGATCGGGTCGACCGAGTACCTGCGGGCGCTCGCCGACTACCGCTCGATGATCTTCGGTGCCCTGATCCTGA TCGTGCTGCTCTGGAAGCCCGGCGGCCTGGTGCAGATCCTCGGGATCGGTGACACCAGATCGTCGAGCTACAAGTTCCCG TTCTCCCTGTTCGGCCGGCGTCGCACGGCCGGTGAGACGACGCCCAACACCCACGCTCGGGTCGAACCGATCGCCGAGGA GGTGCGGCCATGA
Upstream 100 bases:
>100_bases CCGGGTCCTACCGCGACGCGATCGCCTTCTTCCTGCTGATCGTCATTCTGCTCGTCCGCCCCGCCGGCCTGCTCGGCGCC CGTGTCCAGGAGCGTGTGTG
Downstream 100 bases:
>100_bases CCGCCGCCACGCTGGACGCTCCGATCTTCAAGGCCACCGATGTCGGCTGCCGCTTCGGCGGCGTCGTGGCCCTGGACAAG GTCGACTTCGAGGTCGGGCA
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFGAGAYISARLLLD TGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIE NIYLFILVVTIVTTAFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKPGGLVQILGIGDTRSSSYKFP FSLFGRRRTAGETTPNTHARVEPIAEEVRP
Sequences:
>Translated_350_residues MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFGAGAYISARLLLD TGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIE NIYLFILVVTIVTTAFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKPGGLVQILGIGDTRSSSYKFP FSLFGRRRTAGETTPNTHARVEPIAEEVRP >Mature_350_residues MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFGAGAYISARLLLD TGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIE NIYLFILVVTIVTTAFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKPGGLVQILGIGDTRSSSYKFP FSLFGRRRTAGETTPNTHARVEPIAEEVRP
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=303, Percent_Identity=30.3630363036304, Blast_Score=139, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 36966; Mature: 36966
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGHAAMFGAGAYISARLLLDTGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITL HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH GVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIENIYLFILVVTIVTTAFAWLI HHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF HHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKP CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GGLVQILGIGDTRSSSYKFPFSLFGRRRTAGETTPNTHARVEPIAEEVRP CCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGHAAMFGAGAYISARLLLDTGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITL HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH GVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIENIYLFILVVTIVTTAFAWLI HHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF HHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKP CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GGLVQILGIGDTRSSSYKFPFSLFGRRRTAGETTPNTHARVEPIAEEVRP CCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]