| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716064
Identifier: 119716064
GI number: 119716064
Start: 1951957
End: 1953312
Strand: Direct
Name: 119716064
Synonym: Noca_1831
Alternate gene names: NA
Gene position: 1951957-1953312 (Clockwise)
Preceding gene: 119716063
Following gene: 119716065
Centisome position: 39.15
GC content: 72.42
Gene sequence:
>1356_bases GTGGATCCACGTCGACCCGGAGCGTGCCGGCCAGGGCCCGTTCGGCGGCACCATCGCGCACGGCTACCTGACGTTGTCGA TGGTCCCGATGATGACCTGGGAGACGATGCGCATCGAGGGCCTGTCGATGGAGGTCAACTATGGCGCCGAGAAGGTGCGG TTCCCCGCGCCGGTGCTCGTGGGCTCGCGGGTCCGCGCCGGGATCGAGTTGCTCACCCTCGCCCCCGCCGGGGACGGGTA CCGGCTGACCTCGCGCATCACGGTCGAGCGCGACGGCGGGGACAAGCCGGTCTGCGTGGTGGACGCGGTCTCCTACCTGG TCGCGTGATGGACGCGGCGGTGCCCGGGCTCGACGTGGCCAGGTTCACAACCTGGTTCGCCGGCGCACGCCGCGACCTGG CCGGTGACCTGGGCGGCGCGGTCTCGGCGTCCGGCGTCGCCGGTGGCAAGTCGAACCTCACCTACGAGCTGGTTGCCGGA GCGCGTCGCTGGGTGGTGCGGCGGGCGCCGCTGGGACACGTGCTGGCCACCGCGCATGACATGGCGCGCGAGTACCGGGT GATGACCGCGCTCGCGGAGACCGCCGTTCCGGTGCCGAGGACGGTCGCGCTCTGCGAGGACCCCGACGTGACCGGGGCGG TCACCTACGTCATGGAGCACGTCGCCGGTACGCCGTACCGGAACGCCGCGCAGCTGGCGCCGCTCGGCCCGGGCCGGGTC CACGGGATCGCCGAGGGCCTGGTGGACACCCTGGTCGACCTGCACCGGGTGGATCCCGGTGCGGTCGGGCTGGCCGACTT CGGTCGCCCGGACGGGTTCCTGGAGCGGCAGGTCCGCCGCTGGCGCACACAGATGGACGGTTCGCTGCGCCGCGAGATGC CGGCTGCGGGGACGCTGCACCAGATGCTGCTCGACCGGCTGCCGTCCTCGACGGGGCCGGGGCGGATCGTGCACGACGAC TACCGGCTGGACAACGTGCTCGTCGACGCCGAGGACCGGCCGGCCGCGGTGATCGACTGGGAGATGGCCACCCTCGGCGA TCCGCTCACCGATCTGGCCATGCTGGTGATCTACTGCCGGATCGCCGGTGGCGACGCGGTCGCGGACGCCGCCAACGCGC CCGGTTTCCTCGCCGAGGACGAGATCCTCGACCGCTACGCGACCCGGGCCGGGACCGCCCTGGCCGGGTTCGGCTTCTAC CTCGGCCTCGCCGCCTTCAAGCTGGCGGCGATCCTGGAAGGCATCCACGTGCGGTTCCAGCAGGGCCAGACGGTGGGCGC CGGCTTCGAGGGCGTCGGTGCCGTCACCGCACCTCTGCTCGACCTCGGCATCTCTTCGACGAAGGAGCTCGACTGA
Upstream 100 bases:
>100_bases AGCTGTCCGAGGCACTCGGCACCCACGTCGGCTACTCGGGCTGGCACACCGTCAGCCAGGAGCAGATCGACGGCTTCGCC GACGCCACCGGTGACCACCA
Downstream 100 bases:
>100_bases TGGATTTCGGCTACGACGCCCGCACGGAGGACCTGCGGGAGAACCTGCTCGACTTCATGGACTCGCACGTCTACCCGGCG GAGGCGGTCTTCCACGAGCA
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MDPRRPGACRPGPVRRHHRARLPDVVDGPDDDLGDDAHRGPVDGGQLWRREGAVPRAGARGLAGPRRDRVAHPRPRRGRV PADLAHHGRARRRGQAGLRGGRGLLPGRVMDAAVPGLDVARFTTWFAGARRDLAGDLGGAVSASGVAGGKSNLTYELVAG ARRWVVRRAPLGHVLATAHDMAREYRVMTALAETAVPVPRTVALCEDPDVTGAVTYVMEHVAGTPYRNAAQLAPLGPGRV HGIAEGLVDTLVDLHRVDPGAVGLADFGRPDGFLERQVRRWRTQMDGSLRREMPAAGTLHQMLLDRLPSSTGPGRIVHDD YRLDNVLVDAEDRPAAVIDWEMATLGDPLTDLAMLVIYCRIAGGDAVADAANAPGFLAEDEILDRYATRAGTALAGFGFY LGLAAFKLAAILEGIHVRFQQGQTVGAGFEGVGAVTAPLLDLGISSTKELD
Sequences:
>Translated_451_residues MDPRRPGACRPGPVRRHHRARLPDVVDGPDDDLGDDAHRGPVDGGQLWRREGAVPRAGARGLAGPRRDRVAHPRPRRGRV PADLAHHGRARRRGQAGLRGGRGLLPGRVMDAAVPGLDVARFTTWFAGARRDLAGDLGGAVSASGVAGGKSNLTYELVAG ARRWVVRRAPLGHVLATAHDMAREYRVMTALAETAVPVPRTVALCEDPDVTGAVTYVMEHVAGTPYRNAAQLAPLGPGRV HGIAEGLVDTLVDLHRVDPGAVGLADFGRPDGFLERQVRRWRTQMDGSLRREMPAAGTLHQMLLDRLPSSTGPGRIVHDD YRLDNVLVDAEDRPAAVIDWEMATLGDPLTDLAMLVIYCRIAGGDAVADAANAPGFLAEDEILDRYATRAGTALAGFGFY LGLAAFKLAAILEGIHVRFQQGQTVGAGFEGVGAVTAPLLDLGISSTKELD >Mature_451_residues MDPRRPGACRPGPVRRHHRARLPDVVDGPDDDLGDDAHRGPVDGGQLWRREGAVPRAGARGLAGPRRDRVAHPRPRRGRV PADLAHHGRARRRGQAGLRGGRGLLPGRVMDAAVPGLDVARFTTWFAGARRDLAGDLGGAVSASGVAGGKSNLTYELVAG ARRWVVRRAPLGHVLATAHDMAREYRVMTALAETAVPVPRTVALCEDPDVTGAVTYVMEHVAGTPYRNAAQLAPLGPGRV HGIAEGLVDTLVDLHRVDPGAVGLADFGRPDGFLERQVRRWRTQMDGSLRREMPAAGTLHQMLLDRLPSSTGPGRIVHDD YRLDNVLVDAEDRPAAVIDWEMATLGDPLTDLAMLVIYCRIAGGDAVADAANAPGFLAEDEILDRYATRAGTALAGFGFY LGLAAFKLAAILEGIHVRFQQGQTVGAGFEGVGAVTAPLLDLGISSTKELD
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI38505218, Length=307, Percent_Identity=31.2703583061889, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI48976061, Length=321, Percent_Identity=34.2679127725857, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI211971008, Length=321, Percent_Identity=34.2679127725857, Blast_Score=171, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17562446, Length=286, Percent_Identity=32.1678321678322, Blast_Score=145, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48031; Mature: 48031
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRRPGACRPGPVRRHHRARLPDVVDGPDDDLGDDAHRGPVDGGQLWRREGAVPRAGAR CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC GLAGPRRDRVAHPRPRRGRVPADLAHHGRARRRGQAGLRGGRGLLPGRVMDAAVPGLDVA CCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHH RFTTWFAGARRDLAGDLGGAVSASGVAGGKSNLTYELVAGARRWVVRRAPLGHVLATAHD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH MAREYRVMTALAETAVPVPRTVALCEDPDVTGAVTYVMEHVAGTPYRNAAQLAPLGPGRV HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCHH HGIAEGLVDTLVDLHRVDPGAVGLADFGRPDGFLERQVRRWRTQMDGSLRREMPAAGTLH HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHH QMLLDRLPSSTGPGRIVHDDYRLDNVLVDAEDRPAAVIDWEMATLGDPLTDLAMLVIYCR HHHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHH IAGGDAVADAANAPGFLAEDEILDRYATRAGTALAGFGFYLGLAAFKLAAILEGIHVRFQ HCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGQTVGAGFEGVGAVTAPLLDLGISSTKELD CCCEECCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDPRRPGACRPGPVRRHHRARLPDVVDGPDDDLGDDAHRGPVDGGQLWRREGAVPRAGAR CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC GLAGPRRDRVAHPRPRRGRVPADLAHHGRARRRGQAGLRGGRGLLPGRVMDAAVPGLDVA CCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHH RFTTWFAGARRDLAGDLGGAVSASGVAGGKSNLTYELVAGARRWVVRRAPLGHVLATAHD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH MAREYRVMTALAETAVPVPRTVALCEDPDVTGAVTYVMEHVAGTPYRNAAQLAPLGPGRV HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCHH HGIAEGLVDTLVDLHRVDPGAVGLADFGRPDGFLERQVRRWRTQMDGSLRREMPAAGTLH HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHH QMLLDRLPSSTGPGRIVHDDYRLDNVLVDAEDRPAAVIDWEMATLGDPLTDLAMLVIYCR HHHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHH IAGGDAVADAANAPGFLAEDEILDRYATRAGTALAGFGFYLGLAAFKLAAILEGIHVRFQ HCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGQTVGAGFEGVGAVTAPLLDLGISSTKELD CCCEECCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA